Protein–RNA interactions for Protein: P51858

HDGF, Hepatoma-derived growth factor, humanhuman

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP51858 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC24.92■■□□□ 1.58
HDGFP51858 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HDGFP51858 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HDGFP51858 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HDGFP51858 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HDGFP51858 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
HDGFP51858 AC067863.1-201ENST00000494933 530 ntBASIC24.92■■□□□ 1.58
HDGFP51858 AC109322.1-201ENST00000524499 1264 ntBASIC24.92■■□□□ 1.58
HDGFP51858 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC24.92■■□□□ 1.58
HDGFP51858 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC24.92■■□□□ 1.58
HDGFP51858 DUT-210ENST00000559935 569 ntTSL 3 BASIC24.92■■□□□ 1.58
HDGFP51858 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HDGFP51858 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC24.92■■□□□ 1.58
HDGFP51858 INO80C-206ENST00000586489 594 ntTSL 3 BASIC24.92■■□□□ 1.58
HDGFP51858 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC24.92■■□□□ 1.58
HDGFP51858 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC24.92■■□□□ 1.58
HDGFP51858 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
HDGFP51858 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC24.92■■□□□ 1.58
HDGFP51858 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
HDGFP51858 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC24.92■■□□□ 1.58
HDGFP51858 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HDGFP51858 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC24.91■■□□□ 1.58
HDGFP51858 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HDGFP51858 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HDGFP51858 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
HDGFP51858 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HDGFP51858 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
HDGFP51858 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC24.91■■□□□ 1.58
HDGFP51858 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC24.91■■□□□ 1.58
HDGFP51858 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC24.91■■□□□ 1.58
HDGFP51858 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
HDGFP51858 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC24.91■■□□□ 1.58
HDGFP51858 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC24.91■■□□□ 1.58
HDGFP51858 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
HDGFP51858 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HDGFP51858 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC24.91■■□□□ 1.58
HDGFP51858 AC138761.1-201ENST00000584393 385 ntBASIC24.91■■□□□ 1.58
HDGFP51858 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC24.91■■□□□ 1.58
HDGFP51858 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC24.91■■□□□ 1.58
HDGFP51858 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HDGFP51858 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC24.91■■□□□ 1.58
HDGFP51858 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC24.9■■□□□ 1.58
HDGFP51858 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HDGFP51858 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
HDGFP51858 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC24.9■■□□□ 1.58
HDGFP51858 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HDGFP51858 AL590787.1-201ENST00000568856 1315 ntBASIC24.9■■□□□ 1.58
HDGFP51858 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC24.9■■□□□ 1.58
HDGFP51858 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
HDGFP51858 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC24.9■■□□□ 1.58
HDGFP51858 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC24.9■■□□□ 1.58
HDGFP51858 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
HDGFP51858 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HDGFP51858 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
HDGFP51858 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC24.9■■□□□ 1.58
HDGFP51858 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC24.9■■□□□ 1.58
HDGFP51858 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HDGFP51858 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HDGFP51858 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
HDGFP51858 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
HDGFP51858 AC116562.4-201ENST00000641316 2276 ntBASIC24.89■■□□□ 1.58
HDGFP51858 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC24.89■■□□□ 1.58
HDGFP51858 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC24.89■■□□□ 1.58
HDGFP51858 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
HDGFP51858 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
HDGFP51858 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
HDGFP51858 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
HDGFP51858 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
HDGFP51858 AC002056.1-201ENST00000395613 760 ntBASIC24.89■■□□□ 1.58
HDGFP51858 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
HDGFP51858 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC24.89■■□□□ 1.58
HDGFP51858 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
HDGFP51858 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC24.89■■□□□ 1.58
HDGFP51858 NMU-203ENST00000507338 658 ntTSL 3 BASIC24.89■■□□□ 1.58
HDGFP51858 FAM86C2P-203ENST00000528684 1004 ntBASIC24.89■■□□□ 1.58
HDGFP51858 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC24.89■■□□□ 1.58
HDGFP51858 MIR4745-201ENST00000577608 62 ntBASIC24.89■■□□□ 1.58
HDGFP51858 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC24.89■■□□□ 1.58
HDGFP51858 PRR29-209ENST00000582540 967 ntTSL 2 BASIC24.89■■□□□ 1.58
HDGFP51858 AC005498.2-205ENST00000593218 784 ntBASIC24.89■■□□□ 1.58
HDGFP51858 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC24.89■■□□□ 1.58
HDGFP51858 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
HDGFP51858 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC24.89■■□□□ 1.57
HDGFP51858 HARS-201ENST00000307633 1780 ntTSL 2 BASIC24.89■■□□□ 1.57
HDGFP51858 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
HDGFP51858 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
HDGFP51858 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
HDGFP51858 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
HDGFP51858 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC24.89■■□□□ 1.57
HDGFP51858 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
HDGFP51858 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
HDGFP51858 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC24.88■■□□□ 1.57
HDGFP51858 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
HDGFP51858 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
HDGFP51858 AL513480.1-201ENST00000451731 511 ntBASIC24.88■■□□□ 1.57
HDGFP51858 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
HDGFP51858 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC24.88■■□□□ 1.57
HDGFP51858 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
HDGFP51858 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
HDGFP51858 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms