Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC3P51654 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC3P51654 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GPC3P51654 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.56■□□□□ 0.72
GPC3P51654 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC3P51654 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GPC3P51654 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.56■□□□□ 0.72
GPC3P51654 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.56■□□□□ 0.72
GPC3P51654 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.56■□□□□ 0.72
GPC3P51654 AC122714.2-201ENST00000502787 707 ntBASIC19.56■□□□□ 0.72
GPC3P51654 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.56■□□□□ 0.72
GPC3P51654 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.56■□□□□ 0.72
GPC3P51654 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.56■□□□□ 0.72
GPC3P51654 AC021087.4-201ENST00000563761 564 ntBASIC19.56■□□□□ 0.72
GPC3P51654 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.56■□□□□ 0.72
GPC3P51654 AL049840.3-201ENST00000602669 611 ntBASIC19.56■□□□□ 0.72
GPC3P51654 MIR7706-201ENST00000613747 67 ntBASIC19.56■□□□□ 0.72
GPC3P51654 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GPC3P51654 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
GPC3P51654 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC3P51654 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GPC3P51654 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.56■□□□□ 0.72
GPC3P51654 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC3P51654 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.56■□□□□ 0.72
GPC3P51654 AL356309.3-201ENST00000624132 1934 ntBASIC19.56■□□□□ 0.72
GPC3P51654 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC3P51654 AC008764.6-201ENST00000595909 2069 ntBASIC19.56■□□□□ 0.72
GPC3P51654 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.56■□□□□ 0.72
GPC3P51654 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC3P51654 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GPC3P51654 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
GPC3P51654 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC3P51654 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC3P51654 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
GPC3P51654 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
GPC3P51654 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC3P51654 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.55■□□□□ 0.72
GPC3P51654 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
GPC3P51654 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
GPC3P51654 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
GPC3P51654 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.55■□□□□ 0.72
GPC3P51654 AP000997.3-201ENST00000623333 2250 ntBASIC19.55■□□□□ 0.72
GPC3P51654 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GPC3P51654 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC3P51654 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC3P51654 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC3P51654 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
GPC3P51654 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC3P51654 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC3P51654 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
GPC3P51654 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.55■□□□□ 0.72
GPC3P51654 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.55■□□□□ 0.72
GPC3P51654 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GPC3P51654 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.55■□□□□ 0.72
GPC3P51654 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.55■□□□□ 0.72
GPC3P51654 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GPC3P51654 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
GPC3P51654 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.55■□□□□ 0.72
GPC3P51654 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC3P51654 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.55■□□□□ 0.72
GPC3P51654 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.55■□□□□ 0.72
GPC3P51654 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.55■□□□□ 0.72
GPC3P51654 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.55■□□□□ 0.72
GPC3P51654 FAM215A-202ENST00000632077 792 ntBASIC19.55■□□□□ 0.72
GPC3P51654 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.55■□□□□ 0.72
GPC3P51654 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC3P51654 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC3P51654 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
GPC3P51654 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC3P51654 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
GPC3P51654 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
GPC3P51654 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC3P51654 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
GPC3P51654 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GPC3P51654 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GPC3P51654 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
GPC3P51654 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GPC3P51654 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GPC3P51654 IL9RP2-201ENST00000423948 1312 ntBASIC19.54■□□□□ 0.72
GPC3P51654 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GPC3P51654 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.54■□□□□ 0.72
GPC3P51654 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GPC3P51654 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GPC3P51654 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GPC3P51654 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.54■□□□□ 0.72
GPC3P51654 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.54■□□□□ 0.72
GPC3P51654 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GPC3P51654 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GPC3P51654 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GPC3P51654 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
GPC3P51654 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.54■□□□□ 0.72
GPC3P51654 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.54■□□□□ 0.72
GPC3P51654 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GPC3P51654 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
GPC3P51654 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.54■□□□□ 0.72
GPC3P51654 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.54■□□□□ 0.72
GPC3P51654 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GPC3P51654 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GPC3P51654 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GPC3P51654 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms