Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SMARCA2P51531 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
SMARCA2P51531 AC073130.3-201ENST00000624389 2278 ntBASIC31.19■■■□□ 2.58
SMARCA2P51531 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SMARCA2P51531 AL031598.1-201ENST00000561511 1773 ntBASIC31.19■■■□□ 2.58
SMARCA2P51531 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC31.18■■■□□ 2.58
SMARCA2P51531 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SMARCA2P51531 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC31.18■■■□□ 2.58
SMARCA2P51531 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC31.18■■■□□ 2.58
SMARCA2P51531 CENPM-205ENST00000404067 905 ntTSL 3 BASIC31.18■■■□□ 2.58
SMARCA2P51531 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
SMARCA2P51531 FAM86C2P-203ENST00000528684 1004 ntBASIC31.18■■■□□ 2.58
SMARCA2P51531 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SMARCA2P51531 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC31.18■■■□□ 2.58
SMARCA2P51531 AL135744.1-201ENST00000565098 629 ntBASIC31.18■■■□□ 2.58
SMARCA2P51531 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC31.18■■■□□ 2.58
SMARCA2P51531 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SMARCA2P51531 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SMARCA2P51531 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
SMARCA2P51531 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SMARCA2P51531 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC31.18■■■□□ 2.58
SMARCA2P51531 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC31.18■■■□□ 2.58
SMARCA2P51531 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
SMARCA2P51531 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SMARCA2P51531 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SMARCA2P51531 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC31.18■■■□□ 2.58
SMARCA2P51531 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
SMARCA2P51531 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SMARCA2P51531 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SMARCA2P51531 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SMARCA2P51531 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
SMARCA2P51531 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC31.17■■■□□ 2.58
SMARCA2P51531 AC107890.1-201ENST00000422478 521 ntBASIC31.17■■■□□ 2.58
SMARCA2P51531 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC31.17■■■□□ 2.58
SMARCA2P51531 FAM58DP-201ENST00000428076 619 ntBASIC31.17■■■□□ 2.58
SMARCA2P51531 AC079140.1-201ENST00000508039 487 ntBASIC31.17■■■□□ 2.58
SMARCA2P51531 IGHV3-52-201ENST00000519770 353 ntBASIC31.17■■■□□ 2.58
SMARCA2P51531 AC140878.1-201ENST00000565277 250 ntBASIC31.17■■■□□ 2.58
SMARCA2P51531 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SMARCA2P51531 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC31.17■■■□□ 2.58
SMARCA2P51531 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC31.17■■■□□ 2.58
SMARCA2P51531 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
SMARCA2P51531 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SMARCA2P51531 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC31.17■■■□□ 2.58
SMARCA2P51531 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SMARCA2P51531 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
SMARCA2P51531 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SMARCA2P51531 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC31.17■■■□□ 2.58
SMARCA2P51531 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC31.17■■■□□ 2.58
SMARCA2P51531 GRAP-202ENST00000395635 834 ntTSL 2 BASIC31.17■■■□□ 2.58
SMARCA2P51531 RPL30-202ENST00000396070 440 ntTSL 2 BASIC31.17■■■□□ 2.58
SMARCA2P51531 CRB3P1-201ENST00000449338 276 ntBASIC31.17■■■□□ 2.58
SMARCA2P51531 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
SMARCA2P51531 AC125807.1-201ENST00000483097 614 ntBASIC31.17■■■□□ 2.58
SMARCA2P51531 SLC25A6P2-201ENST00000497974 877 ntBASIC31.17■■■□□ 2.58
SMARCA2P51531 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
SMARCA2P51531 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SMARCA2P51531 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SMARCA2P51531 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC31.16■■■□□ 2.58
SMARCA2P51531 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC31.16■■■□□ 2.58
SMARCA2P51531 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC31.16■■■□□ 2.58
SMARCA2P51531 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC31.16■■■□□ 2.58
SMARCA2P51531 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC31.16■■■□□ 2.58
SMARCA2P51531 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC31.16■■■□□ 2.58
SMARCA2P51531 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC31.16■■■□□ 2.58
SMARCA2P51531 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC31.16■■■□□ 2.58
SMARCA2P51531 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SMARCA2P51531 CECR7-204ENST00000609932 568 ntTSL 2 BASIC31.16■■■□□ 2.58
SMARCA2P51531 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
SMARCA2P51531 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC31.16■■■□□ 2.58
SMARCA2P51531 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC31.15■■■□□ 2.58
SMARCA2P51531 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC31.15■■■□□ 2.58
SMARCA2P51531 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
SMARCA2P51531 TUBB3P1-201ENST00000405796 1332 ntBASIC31.15■■■□□ 2.58
SMARCA2P51531 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SMARCA2P51531 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC31.15■■■□□ 2.58
SMARCA2P51531 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC31.15■■■□□ 2.58
SMARCA2P51531 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC31.15■■■□□ 2.58
SMARCA2P51531 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SMARCA2P51531 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SMARCA2P51531 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
SMARCA2P51531 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC31.15■■■□□ 2.58
SMARCA2P51531 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
SMARCA2P51531 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SMARCA2P51531 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SMARCA2P51531 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC31.14■■■□□ 2.58
SMARCA2P51531 AL158211.3-201ENST00000607385 239 ntBASIC31.14■■■□□ 2.58
SMARCA2P51531 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SMARCA2P51531 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SMARCA2P51531 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
SMARCA2P51531 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SMARCA2P51531 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC31.14■■■□□ 2.57
SMARCA2P51531 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC31.13■■■□□ 2.57
SMARCA2P51531 BAD-207ENST00000544785 525 ntTSL 3 BASIC31.13■■■□□ 2.57
SMARCA2P51531 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SMARCA2P51531 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SMARCA2P51531 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SMARCA2P51531 MIR943-201ENST00000401286 94 ntBASIC31.13■■■□□ 2.57
SMARCA2P51531 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC31.13■■■□□ 2.57
SMARCA2P51531 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms