Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CENPFP49454 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CENPFP49454 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.84■□□□□ 0.77
CENPFP49454 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.84■□□□□ 0.77
CENPFP49454 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CENPFP49454 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CENPFP49454 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CENPFP49454 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.83■□□□□ 0.77
CENPFP49454 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CENPFP49454 AC074386.1-202ENST00000463561 864 ntBASIC19.83■□□□□ 0.77
CENPFP49454 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.83■□□□□ 0.77
CENPFP49454 AL596325.1-201ENST00000563991 1082 ntBASIC19.83■□□□□ 0.77
CENPFP49454 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CENPFP49454 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CENPFP49454 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CENPFP49454 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
CENPFP49454 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CENPFP49454 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CENPFP49454 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CENPFP49454 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.83■□□□□ 0.76
CENPFP49454 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.83■□□□□ 0.76
CENPFP49454 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CENPFP49454 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CENPFP49454 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.83■□□□□ 0.76
CENPFP49454 SERBP1P5-201ENST00000510079 1181 ntBASIC19.83■□□□□ 0.76
CENPFP49454 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CENPFP49454 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CENPFP49454 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CENPFP49454 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CENPFP49454 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CENPFP49454 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CENPFP49454 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CENPFP49454 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CENPFP49454 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CENPFP49454 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CENPFP49454 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.82■□□□□ 0.76
CENPFP49454 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.82■□□□□ 0.76
CENPFP49454 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.82■□□□□ 0.76
CENPFP49454 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.82■□□□□ 0.76
CENPFP49454 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CENPFP49454 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CENPFP49454 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.82■□□□□ 0.76
CENPFP49454 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CENPFP49454 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.82■□□□□ 0.76
CENPFP49454 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CENPFP49454 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CENPFP49454 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CENPFP49454 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CENPFP49454 ARSEP1-201ENST00000420443 635 ntBASIC19.82■□□□□ 0.76
CENPFP49454 AC245100.3-201ENST00000441281 285 ntBASIC19.82■□□□□ 0.76
CENPFP49454 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.82■□□□□ 0.76
CENPFP49454 TIMM8BP1-201ENST00000452384 211 ntBASIC19.82■□□□□ 0.76
CENPFP49454 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.82■□□□□ 0.76
CENPFP49454 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.82■□□□□ 0.76
CENPFP49454 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.82■□□□□ 0.76
CENPFP49454 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CENPFP49454 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.82■□□□□ 0.76
CENPFP49454 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CENPFP49454 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CENPFP49454 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.82■□□□□ 0.76
CENPFP49454 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CENPFP49454 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CENPFP49454 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.81■□□□□ 0.76
CENPFP49454 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.81■□□□□ 0.76
CENPFP49454 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CENPFP49454 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CENPFP49454 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CENPFP49454 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.81■□□□□ 0.76
CENPFP49454 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.81■□□□□ 0.76
CENPFP49454 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CENPFP49454 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CENPFP49454 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.81■□□□□ 0.76
CENPFP49454 AL359881.2-201ENST00000602973 570 ntBASIC19.81■□□□□ 0.76
CENPFP49454 AC116562.4-201ENST00000641316 2276 ntBASIC19.81■□□□□ 0.76
CENPFP49454 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
CENPFP49454 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CENPFP49454 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CENPFP49454 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CENPFP49454 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CENPFP49454 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.81■□□□□ 0.76
CENPFP49454 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.81■□□□□ 0.76
CENPFP49454 KLF2P3-201ENST00000451977 1087 ntBASIC19.81■□□□□ 0.76
CENPFP49454 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.81■□□□□ 0.76
CENPFP49454 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.81■□□□□ 0.76
CENPFP49454 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.81■□□□□ 0.76
CENPFP49454 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CENPFP49454 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CENPFP49454 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CENPFP49454 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
CENPFP49454 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CENPFP49454 AC009949.1-201ENST00000623048 1830 ntBASIC19.8■□□□□ 0.76
CENPFP49454 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CENPFP49454 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.8■□□□□ 0.76
CENPFP49454 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CENPFP49454 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.8■□□□□ 0.76
CENPFP49454 AL020989.1-201ENST00000422979 469 ntBASIC19.8■□□□□ 0.76
CENPFP49454 AC125807.1-201ENST00000483097 614 ntBASIC19.8■□□□□ 0.76
CENPFP49454 RPS15P9-201ENST00000494093 319 ntBASIC19.8■□□□□ 0.76
CENPFP49454 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.8■□□□□ 0.76
CENPFP49454 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms