Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCC3P46736 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRCC3P46736 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRCC3P46736 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCC3P46736 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCC3P46736 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
BRCC3P46736 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCC3P46736 ZNF259P1-201ENST00000407656 1365 ntBASIC18.81■□□□□ 0.6
BRCC3P46736 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRCC3P46736 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCC3P46736 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCC3P46736 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCC3P46736 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.81■□□□□ 0.6
BRCC3P46736 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.81■□□□□ 0.6
BRCC3P46736 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.81■□□□□ 0.6
BRCC3P46736 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCC3P46736 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCC3P46736 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCC3P46736 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.81■□□□□ 0.6
BRCC3P46736 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.81■□□□□ 0.6
BRCC3P46736 PRYP5-201ENST00000451909 266 ntBASIC18.81■□□□□ 0.6
BRCC3P46736 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.81■□□□□ 0.6
BRCC3P46736 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.81■□□□□ 0.6
BRCC3P46736 RNA5SP415-201ENST00000517246 115 ntBASIC18.81■□□□□ 0.6
BRCC3P46736 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.81■□□□□ 0.6
BRCC3P46736 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCC3P46736 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCC3P46736 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCC3P46736 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCC3P46736 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.81■□□□□ 0.6
BRCC3P46736 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCC3P46736 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRCC3P46736 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
BRCC3P46736 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCC3P46736 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCC3P46736 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCC3P46736 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCC3P46736 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCC3P46736 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
BRCC3P46736 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCC3P46736 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCC3P46736 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.8■□□□□ 0.6
BRCC3P46736 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.8■□□□□ 0.6
BRCC3P46736 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRCC3P46736 KRT18P55-202ENST00000578578 1546 ntBASIC18.8■□□□□ 0.6
BRCC3P46736 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCC3P46736 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
BRCC3P46736 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCC3P46736 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.8■□□□□ 0.6
BRCC3P46736 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.8■□□□□ 0.6
BRCC3P46736 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.8■□□□□ 0.6
BRCC3P46736 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCC3P46736 AC138028.4-201ENST00000564984 1845 ntBASIC18.8■□□□□ 0.6
BRCC3P46736 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCC3P46736 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.8■□□□□ 0.6
BRCC3P46736 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.8■□□□□ 0.6
BRCC3P46736 KLF4P1-201ENST00000412782 1185 ntBASIC18.8■□□□□ 0.6
BRCC3P46736 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.8■□□□□ 0.6
BRCC3P46736 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
BRCC3P46736 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.8■□□□□ 0.6
BRCC3P46736 AC145285.3-201ENST00000564603 959 ntBASIC18.8■□□□□ 0.6
BRCC3P46736 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.8■□□□□ 0.6
BRCC3P46736 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.8■□□□□ 0.6
BRCC3P46736 AC117500.6-201ENST00000624871 588 ntBASIC18.8■□□□□ 0.6
BRCC3P46736 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRCC3P46736 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCC3P46736 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
BRCC3P46736 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.8■□□□□ 0.6
BRCC3P46736 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCC3P46736 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCC3P46736 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRCC3P46736 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCC3P46736 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
BRCC3P46736 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.8■□□□□ 0.6
BRCC3P46736 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.8■□□□□ 0.6
BRCC3P46736 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRCC3P46736 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRCC3P46736 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.79■□□□□ 0.6
BRCC3P46736 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRCC3P46736 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRCC3P46736 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.79■□□□□ 0.6
BRCC3P46736 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
BRCC3P46736 BICD1-207ENST00000551848 1962 ntBASIC18.79■□□□□ 0.6
BRCC3P46736 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
BRCC3P46736 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.79■□□□□ 0.6
BRCC3P46736 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRCC3P46736 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRCC3P46736 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRCC3P46736 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRCC3P46736 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.79■□□□□ 0.6
BRCC3P46736 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.79■□□□□ 0.6
BRCC3P46736 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.79■□□□□ 0.6
BRCC3P46736 AC034105.1-201ENST00000563488 319 ntBASIC18.79■□□□□ 0.6
BRCC3P46736 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.79■□□□□ 0.6
BRCC3P46736 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
BRCC3P46736 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.79■□□□□ 0.6
BRCC3P46736 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
BRCC3P46736 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRCC3P46736 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRCC3P46736 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms