Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SNCAP37840 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SNCAP37840 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.64□□□□□ -0.07
SNCAP37840 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.64□□□□□ -0.07
SNCAP37840 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SNCAP37840 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SNCAP37840 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.64□□□□□ -0.07
SNCAP37840 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SNCAP37840 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
SNCAP37840 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNCAP37840 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.63□□□□□ -0.07
SNCAP37840 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SNCAP37840 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNCAP37840 AC096733.2-201ENST00000609937 1394 ntBASIC14.63□□□□□ -0.07
SNCAP37840 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
SNCAP37840 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNCAP37840 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SNCAP37840 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNCAP37840 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.63□□□□□ -0.07
SNCAP37840 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNCAP37840 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.63□□□□□ -0.07
SNCAP37840 KRT18P29-201ENST00000397031 1267 ntBASIC14.63□□□□□ -0.07
SNCAP37840 MFAP1P1-201ENST00000442257 1255 ntBASIC14.63□□□□□ -0.07
SNCAP37840 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.63□□□□□ -0.07
SNCAP37840 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.63□□□□□ -0.07
SNCAP37840 AP001412.1-201ENST00000608405 714 ntBASIC14.63□□□□□ -0.07
SNCAP37840 AC008622.2-201ENST00000617006 1229 ntBASIC14.63□□□□□ -0.07
SNCAP37840 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNCAP37840 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SNCAP37840 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNCAP37840 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SNCAP37840 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SNCAP37840 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNCAP37840 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.63□□□□□ -0.07
SNCAP37840 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.63□□□□□ -0.07
SNCAP37840 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNCAP37840 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.63□□□□□ -0.07
SNCAP37840 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNCAP37840 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNCAP37840 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.63□□□□□ -0.07
SNCAP37840 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.63□□□□□ -0.07
SNCAP37840 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SNCAP37840 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.63□□□□□ -0.07
SNCAP37840 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.62□□□□□ -0.07
SNCAP37840 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
SNCAP37840 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SNCAP37840 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SNCAP37840 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.62□□□□□ -0.07
SNCAP37840 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 GPAT2P1-201ENST00000444924 1672 ntBASIC14.62□□□□□ -0.07
SNCAP37840 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SNCAP37840 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SNCAP37840 CA15P1-201ENST00000481698 905 ntBASIC14.62□□□□□ -0.07
SNCAP37840 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.62□□□□□ -0.07
SNCAP37840 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.62□□□□□ -0.07
SNCAP37840 AC097488.1-201ENST00000507834 756 ntBASIC14.62□□□□□ -0.07
SNCAP37840 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.62□□□□□ -0.07
SNCAP37840 AL359736.2-201ENST00000621992 437 ntBASIC14.62□□□□□ -0.07
SNCAP37840 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
SNCAP37840 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.62□□□□□ -0.07
SNCAP37840 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.62□□□□□ -0.07
SNCAP37840 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 PCDHA1-201ENST00000378133 2726 ntBASIC14.62□□□□□ -0.07
SNCAP37840 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SNCAP37840 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNCAP37840 FLJ38576-201ENST00000623820 2459 ntBASIC14.61□□□□□ -0.07
SNCAP37840 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.61□□□□□ -0.07
SNCAP37840 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.61□□□□□ -0.07
SNCAP37840 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SNCAP37840 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SNCAP37840 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms