Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRNA3P32297 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHRNA3P32297 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.71■□□□□ 0.59
CHRNA3P32297 AL136038.4-201ENST00000603606 1261 ntBASIC18.71■□□□□ 0.59
CHRNA3P32297 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.71■□□□□ 0.59
CHRNA3P32297 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHRNA3P32297 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.71■□□□□ 0.59
CHRNA3P32297 AL391807.1-203ENST00000604392 2365 ntBASIC18.71■□□□□ 0.59
CHRNA3P32297 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.71■□□□□ 0.59
CHRNA3P32297 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CHRNA3P32297 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CHRNA3P32297 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CHRNA3P32297 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRNA3P32297 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.71■□□□□ 0.59
CHRNA3P32297 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CHRNA3P32297 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
CHRNA3P32297 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CHRNA3P32297 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.7■□□□□ 0.58
CHRNA3P32297 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CHRNA3P32297 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA3P32297 AC100803.2-201ENST00000562459 1963 ntBASIC18.7■□□□□ 0.58
CHRNA3P32297 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA3P32297 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CHRNA3P32297 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
CHRNA3P32297 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CHRNA3P32297 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.7■□□□□ 0.58
CHRNA3P32297 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CHRNA3P32297 AL645929.1-201ENST00000420084 975 ntBASIC18.7■□□□□ 0.58
CHRNA3P32297 HLA-F-220ENST00000434407 884 ntBASIC18.7■□□□□ 0.58
CHRNA3P32297 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA3P32297 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA3P32297 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA3P32297 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.7■□□□□ 0.58
CHRNA3P32297 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.7■□□□□ 0.58
CHRNA3P32297 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.7■□□□□ 0.58
CHRNA3P32297 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CHRNA3P32297 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA3P32297 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.7■□□□□ 0.58
CHRNA3P32297 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CHRNA3P32297 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA3P32297 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.7■□□□□ 0.58
CHRNA3P32297 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
CHRNA3P32297 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.7■□□□□ 0.58
CHRNA3P32297 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA3P32297 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA3P32297 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.69■□□□□ 0.58
CHRNA3P32297 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA3P32297 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA3P32297 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA3P32297 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CHRNA3P32297 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHRNA3P32297 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CHRNA3P32297 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA3P32297 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA3P32297 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
CHRNA3P32297 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA3P32297 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHRNA3P32297 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA3P32297 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA3P32297 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA3P32297 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CHRNA3P32297 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA3P32297 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA3P32297 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA3P32297 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.69■□□□□ 0.58
CHRNA3P32297 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.69■□□□□ 0.58
CHRNA3P32297 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CHRNA3P32297 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA3P32297 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA3P32297 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHRNA3P32297 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CHRNA3P32297 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA3P32297 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA3P32297 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.69■□□□□ 0.58
CHRNA3P32297 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CHRNA3P32297 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA3P32297 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA3P32297 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA3P32297 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA3P32297 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA3P32297 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA3P32297 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.68■□□□□ 0.58
CHRNA3P32297 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CHRNA3P32297 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA3P32297 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA3P32297 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA3P32297 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CHRNA3P32297 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CHRNA3P32297 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA3P32297 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA3P32297 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA3P32297 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.68■□□□□ 0.58
CHRNA3P32297 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA3P32297 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.68■□□□□ 0.58
CHRNA3P32297 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.68■□□□□ 0.58
CHRNA3P32297 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.68■□□□□ 0.58
CHRNA3P32297 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.68■□□□□ 0.58
CHRNA3P32297 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.68■□□□□ 0.58
CHRNA3P32297 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.68■□□□□ 0.58
CHRNA3P32297 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms