Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC6A4P31645 AC012317.2-201ENST00000623305 2251 ntBASIC18.18■□□□□ 0.5
SLC6A4P31645 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SLC6A4P31645 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A4P31645 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A4P31645 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A4P31645 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A4P31645 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A4P31645 NOC2LP1-202ENST00000452600 2235 ntBASIC18.17■□□□□ 0.5
SLC6A4P31645 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC6A4P31645 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A4P31645 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A4P31645 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A4P31645 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
SLC6A4P31645 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC6A4P31645 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A4P31645 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC6A4P31645 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.17■□□□□ 0.5
SLC6A4P31645 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.17■□□□□ 0.5
SLC6A4P31645 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SLC6A4P31645 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC6A4P31645 RNA5SP419-201ENST00000515908 135 ntBASIC18.17■□□□□ 0.5
SLC6A4P31645 AC021087.4-201ENST00000563761 564 ntBASIC18.17■□□□□ 0.5
SLC6A4P31645 AC109462.3-201ENST00000573934 613 ntBASIC18.17■□□□□ 0.5
SLC6A4P31645 NKAPP1-205ENST00000585790 367 ntBASIC18.17■□□□□ 0.5
SLC6A4P31645 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A4P31645 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC6A4P31645 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A4P31645 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC6A4P31645 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SLC6A4P31645 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC6A4P31645 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A4P31645 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC6A4P31645 REXO1L11P-201ENST00000620964 1927 ntBASIC18.17■□□□□ 0.5
SLC6A4P31645 AL356309.3-201ENST00000624132 1934 ntBASIC18.17■□□□□ 0.5
SLC6A4P31645 HLA-A-201ENST00000376802 1334 ntBASIC18.17■□□□□ 0.5
SLC6A4P31645 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC6A4P31645 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SLC6A4P31645 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SLC6A4P31645 AC007613.1-201ENST00000572811 2597 ntBASIC18.17■□□□□ 0.5
SLC6A4P31645 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A4P31645 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A4P31645 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
SLC6A4P31645 AC132938.5-201ENST00000624980 1813 ntBASIC18.16■□□□□ 0.5
SLC6A4P31645 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SLC6A4P31645 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC6A4P31645 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC6A4P31645 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SLC6A4P31645 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A4P31645 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC6A4P31645 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC6A4P31645 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A4P31645 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A4P31645 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A4P31645 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A4P31645 KRT18P67-201ENST00000432816 1264 ntBASIC18.16■□□□□ 0.5
SLC6A4P31645 HNRNPDP1-201ENST00000439535 754 ntBASIC18.16■□□□□ 0.5
SLC6A4P31645 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC6A4P31645 AC018712.1-201ENST00000455767 687 ntBASIC18.16■□□□□ 0.5
SLC6A4P31645 RNPS1P1-201ENST00000507437 918 ntBASIC18.16■□□□□ 0.5
SLC6A4P31645 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC6A4P31645 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC6A4P31645 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC6A4P31645 AC073592.5-201ENST00000624854 528 ntBASIC18.16■□□□□ 0.5
SLC6A4P31645 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A4P31645 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A4P31645 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A4P31645 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC6A4P31645 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A4P31645 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC6A4P31645 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A4P31645 AC006116.8-202ENST00000587620 1550 ntBASIC18.16■□□□□ 0.5
SLC6A4P31645 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A4P31645 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A4P31645 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
SLC6A4P31645 AC079776.2-201ENST00000641154 1609 ntBASIC18.16■□□□□ 0.5
SLC6A4P31645 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
SLC6A4P31645 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC6A4P31645 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC6A4P31645 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC6A4P31645 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC6A4P31645 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC6A4P31645 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.15■□□□□ 0.5
SLC6A4P31645 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.15■□□□□ 0.5
SLC6A4P31645 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 SCARNA2-201ENST00000458748 420 ntBASIC18.15■□□□□ 0.5
SLC6A4P31645 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SLC6A4P31645 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 AL662844.1-201ENST00000546340 181 ntBASIC18.15■□□□□ 0.5
SLC6A4P31645 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms