Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.27■□□□□ 0.36
EPHA3P29320 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EPHA3P29320 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.27■□□□□ 0.36
EPHA3P29320 AP000525.1-201ENST00000608286 694 ntBASIC17.27■□□□□ 0.36
EPHA3P29320 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EPHA3P29320 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
EPHA3P29320 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
EPHA3P29320 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EPHA3P29320 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
EPHA3P29320 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EPHA3P29320 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.27■□□□□ 0.35
EPHA3P29320 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EPHA3P29320 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
EPHA3P29320 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EPHA3P29320 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.27■□□□□ 0.35
EPHA3P29320 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.27■□□□□ 0.35
EPHA3P29320 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
EPHA3P29320 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.26■□□□□ 0.35
EPHA3P29320 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.26■□□□□ 0.35
EPHA3P29320 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
EPHA3P29320 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.26■□□□□ 0.35
EPHA3P29320 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 TSPY20P-201ENST00000450910 630 ntBASIC17.26■□□□□ 0.35
EPHA3P29320 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.26■□□□□ 0.35
EPHA3P29320 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.26■□□□□ 0.35
EPHA3P29320 AC008687.5-201ENST00000593746 558 ntBASIC17.26■□□□□ 0.35
EPHA3P29320 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.26■□□□□ 0.35
EPHA3P29320 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
EPHA3P29320 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.26■□□□□ 0.35
EPHA3P29320 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
EPHA3P29320 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
EPHA3P29320 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.26■□□□□ 0.35
EPHA3P29320 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
EPHA3P29320 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.26■□□□□ 0.35
EPHA3P29320 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
EPHA3P29320 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.26■□□□□ 0.35
EPHA3P29320 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA3P29320 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
EPHA3P29320 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
EPHA3P29320 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
EPHA3P29320 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.25■□□□□ 0.35
EPHA3P29320 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
EPHA3P29320 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
EPHA3P29320 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
EPHA3P29320 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.25■□□□□ 0.35
EPHA3P29320 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.25■□□□□ 0.35
EPHA3P29320 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
EPHA3P29320 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.25■□□□□ 0.35
EPHA3P29320 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.25■□□□□ 0.35
EPHA3P29320 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.25■□□□□ 0.35
EPHA3P29320 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.25■□□□□ 0.35
EPHA3P29320 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
EPHA3P29320 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
EPHA3P29320 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 AC060834.1-201ENST00000443027 2032 ntBASIC17.25■□□□□ 0.35
EPHA3P29320 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA3P29320 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.24■□□□□ 0.35
EPHA3P29320 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
EPHA3P29320 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA3P29320 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.24■□□□□ 0.35
EPHA3P29320 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms