Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.45■□□□□ 0.22
UBL4AP11441 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
UBL4AP11441 AC100803.2-201ENST00000562459 1963 ntBASIC16.45■□□□□ 0.22
UBL4AP11441 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
UBL4AP11441 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 AC134043.2-201ENST00000624206 2238 ntBASIC16.45■□□□□ 0.22
UBL4AP11441 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBL4AP11441 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBL4AP11441 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.44■□□□□ 0.22
UBL4AP11441 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.44■□□□□ 0.22
UBL4AP11441 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
UBL4AP11441 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
UBL4AP11441 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBL4AP11441 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
UBL4AP11441 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBL4AP11441 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBL4AP11441 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.44■□□□□ 0.22
UBL4AP11441 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBL4AP11441 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.44■□□□□ 0.22
UBL4AP11441 RNF126P1-202ENST00000569893 925 ntBASIC16.44■□□□□ 0.22
UBL4AP11441 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
UBL4AP11441 NTF6B-201ENST00000591913 560 ntBASIC16.44■□□□□ 0.22
UBL4AP11441 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.44■□□□□ 0.22
UBL4AP11441 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.44■□□□□ 0.22
UBL4AP11441 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBL4AP11441 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.44■□□□□ 0.22
UBL4AP11441 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.44■□□□□ 0.22
UBL4AP11441 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBL4AP11441 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBL4AP11441 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBL4AP11441 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBL4AP11441 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBL4AP11441 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBL4AP11441 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBL4AP11441 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
UBL4AP11441 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBL4AP11441 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBL4AP11441 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
UBL4AP11441 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.43■□□□□ 0.22
UBL4AP11441 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBL4AP11441 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.43■□□□□ 0.22
UBL4AP11441 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBL4AP11441 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.43■□□□□ 0.22
UBL4AP11441 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
UBL4AP11441 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBL4AP11441 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBL4AP11441 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBL4AP11441 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
UBL4AP11441 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBL4AP11441 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBL4AP11441 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBL4AP11441 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.43■□□□□ 0.22
UBL4AP11441 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.43■□□□□ 0.22
UBL4AP11441 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.43■□□□□ 0.22
UBL4AP11441 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.43■□□□□ 0.22
UBL4AP11441 AC116407.2-201ENST00000613639 860 ntBASIC16.43■□□□□ 0.22
UBL4AP11441 AL590326.2-201ENST00000625139 305 ntBASIC16.43■□□□□ 0.22
UBL4AP11441 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
UBL4AP11441 AC067852.2-201ENST00000590513 2313 ntBASIC16.43■□□□□ 0.22
UBL4AP11441 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBL4AP11441 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
UBL4AP11441 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
UBL4AP11441 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
UBL4AP11441 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.43■□□□□ 0.22
UBL4AP11441 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
UBL4AP11441 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBL4AP11441 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.43■□□□□ 0.22
UBL4AP11441 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
UBL4AP11441 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
UBL4AP11441 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
UBL4AP11441 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.42■□□□□ 0.22
UBL4AP11441 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.42■□□□□ 0.22
UBL4AP11441 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
UBL4AP11441 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
UBL4AP11441 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.42■□□□□ 0.22
UBL4AP11441 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
UBL4AP11441 AC012317.2-201ENST00000623305 2251 ntBASIC16.42■□□□□ 0.22
UBL4AP11441 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBL4AP11441 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
UBL4AP11441 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.42■□□□□ 0.22
UBL4AP11441 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms