Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 FDX1P1-201ENST00000449115 551 ntBASIC14.07□□□□□ -0.16
PF4V1P10720 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.07□□□□□ -0.16
PF4V1P10720 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.07□□□□□ -0.16
PF4V1P10720 AC079776.4-201ENST00000511039 504 ntBASIC14.07□□□□□ -0.16
PF4V1P10720 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.07□□□□□ -0.16
PF4V1P10720 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.07□□□□□ -0.16
PF4V1P10720 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.07□□□□□ -0.16
PF4V1P10720 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
PF4V1P10720 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.07□□□□□ -0.16
PF4V1P10720 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PF4V1P10720 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PF4V1P10720 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.07□□□□□ -0.16
PF4V1P10720 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
PF4V1P10720 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PF4V1P10720 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PF4V1P10720 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PF4V1P10720 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
PF4V1P10720 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PF4V1P10720 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.06□□□□□ -0.16
PF4V1P10720 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.06□□□□□ -0.16
PF4V1P10720 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.06□□□□□ -0.16
PF4V1P10720 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PF4V1P10720 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PF4V1P10720 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PF4V1P10720 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PF4V1P10720 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.06□□□□□ -0.16
PF4V1P10720 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PF4V1P10720 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.06□□□□□ -0.16
PF4V1P10720 AL160237.2-201ENST00000556165 472 ntBASIC14.06□□□□□ -0.16
PF4V1P10720 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.06□□□□□ -0.16
PF4V1P10720 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PF4V1P10720 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.06□□□□□ -0.16
PF4V1P10720 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.06□□□□□ -0.16
PF4V1P10720 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PF4V1P10720 AC132938.6-201ENST00000623828 1655 ntBASIC14.06□□□□□ -0.16
PF4V1P10720 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PF4V1P10720 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.06□□□□□ -0.16
PF4V1P10720 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.06□□□□□ -0.16
PF4V1P10720 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PF4V1P10720 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
PF4V1P10720 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
PF4V1P10720 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PF4V1P10720 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.06□□□□□ -0.16
PF4V1P10720 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PF4V1P10720 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PF4V1P10720 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.05□□□□□ -0.16
PF4V1P10720 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 ABALON-201ENST00000629058 1903 ntBASIC14.05□□□□□ -0.16
PF4V1P10720 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.05□□□□□ -0.16
PF4V1P10720 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PF4V1P10720 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
PF4V1P10720 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PF4V1P10720 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PF4V1P10720 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.05□□□□□ -0.16
PF4V1P10720 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
PF4V1P10720 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.05□□□□□ -0.16
PF4V1P10720 AC079781.3-201ENST00000449110 356 ntBASIC14.05□□□□□ -0.16
PF4V1P10720 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 AL662844.1-201ENST00000546340 181 ntBASIC14.05□□□□□ -0.16
PF4V1P10720 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.05□□□□□ -0.16
PF4V1P10720 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.05□□□□□ -0.16
PF4V1P10720 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.05□□□□□ -0.16
PF4V1P10720 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PF4V1P10720 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.05□□□□□ -0.16
PF4V1P10720 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms