Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RARAP10276 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RARAP10276 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RARAP10276 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RARAP10276 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RARAP10276 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
RARAP10276 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
RARAP10276 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RARAP10276 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RARAP10276 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.62■□□□□ 0.57
RARAP10276 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RARAP10276 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.62■□□□□ 0.57
RARAP10276 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RARAP10276 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.62■□□□□ 0.57
RARAP10276 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RARAP10276 AL671277.2-201ENST00000458060 996 ntBASIC18.62■□□□□ 0.57
RARAP10276 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.62■□□□□ 0.57
RARAP10276 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.62■□□□□ 0.57
RARAP10276 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RARAP10276 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.62■□□□□ 0.57
RARAP10276 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RARAP10276 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.62■□□□□ 0.57
RARAP10276 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RARAP10276 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RARAP10276 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RARAP10276 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.62■□□□□ 0.57
RARAP10276 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.62■□□□□ 0.57
RARAP10276 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RARAP10276 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.62■□□□□ 0.57
RARAP10276 AC009949.1-201ENST00000623048 1830 ntBASIC18.62■□□□□ 0.57
RARAP10276 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RARAP10276 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.62■□□□□ 0.57
RARAP10276 AD000864.1-201ENST00000624076 2295 ntBASIC18.62■□□□□ 0.57
RARAP10276 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.62■□□□□ 0.57
RARAP10276 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.62■□□□□ 0.57
RARAP10276 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RARAP10276 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RARAP10276 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RARAP10276 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RARAP10276 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RARAP10276 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RARAP10276 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.61■□□□□ 0.57
RARAP10276 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RARAP10276 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RARAP10276 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RARAP10276 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RARAP10276 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RARAP10276 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RARAP10276 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.61■□□□□ 0.57
RARAP10276 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RARAP10276 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RARAP10276 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RARAP10276 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.61■□□□□ 0.57
RARAP10276 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RARAP10276 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.61■□□□□ 0.57
RARAP10276 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.61■□□□□ 0.57
RARAP10276 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.61■□□□□ 0.57
RARAP10276 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RARAP10276 AL390719.2-201ENST00000606993 987 ntBASIC18.61■□□□□ 0.57
RARAP10276 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RARAP10276 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.61■□□□□ 0.57
RARAP10276 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.61■□□□□ 0.57
RARAP10276 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.61■□□□□ 0.57
RARAP10276 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RARAP10276 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RARAP10276 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.61■□□□□ 0.57
RARAP10276 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RARAP10276 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RARAP10276 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RARAP10276 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RARAP10276 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RARAP10276 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RARAP10276 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RARAP10276 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RARAP10276 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RARAP10276 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RARAP10276 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RARAP10276 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RARAP10276 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RARAP10276 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RARAP10276 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RARAP10276 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.6■□□□□ 0.57
RARAP10276 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RARAP10276 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RARAP10276 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RARAP10276 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RARAP10276 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.6■□□□□ 0.57
RARAP10276 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.6■□□□□ 0.57
RARAP10276 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
RARAP10276 AC112698.1-201ENST00000510299 916 ntBASIC18.6■□□□□ 0.57
RARAP10276 LINC01238-205ENST00000567549 1107 ntBASIC18.6■□□□□ 0.57
RARAP10276 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RARAP10276 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RARAP10276 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RARAP10276 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RARAP10276 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RARAP10276 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RARAP10276 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.6■□□□□ 0.57
RARAP10276 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.6■□□□□ 0.57
RARAP10276 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms