Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PDGFAP04085 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDGFAP04085 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PDGFAP04085 AL024508.2-201ENST00000607749 1894 ntBASIC16.59■□□□□ 0.25
PDGFAP04085 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PDGFAP04085 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDGFAP04085 RPS2P28-201ENST00000314255 741 ntBASIC16.59■□□□□ 0.25
PDGFAP04085 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDGFAP04085 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.59■□□□□ 0.25
PDGFAP04085 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PDGFAP04085 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.59■□□□□ 0.25
PDGFAP04085 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.59■□□□□ 0.25
PDGFAP04085 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.59■□□□□ 0.25
PDGFAP04085 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.59■□□□□ 0.25
PDGFAP04085 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.59■□□□□ 0.25
PDGFAP04085 AC034105.1-201ENST00000563488 319 ntBASIC16.59■□□□□ 0.25
PDGFAP04085 AC011467.2-201ENST00000598425 242 ntBASIC16.59■□□□□ 0.25
PDGFAP04085 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.59■□□□□ 0.25
PDGFAP04085 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.59■□□□□ 0.25
PDGFAP04085 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PDGFAP04085 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDGFAP04085 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PDGFAP04085 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDGFAP04085 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.59■□□□□ 0.25
PDGFAP04085 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDGFAP04085 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.59■□□□□ 0.25
PDGFAP04085 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.59■□□□□ 0.25
PDGFAP04085 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
PDGFAP04085 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PDGFAP04085 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDGFAP04085 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.59■□□□□ 0.25
PDGFAP04085 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDGFAP04085 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.59■□□□□ 0.25
PDGFAP04085 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.59■□□□□ 0.25
PDGFAP04085 SDHAP2-201ENST00000455183 2001 ntBASIC16.58■□□□□ 0.25
PDGFAP04085 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDGFAP04085 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDGFAP04085 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDGFAP04085 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDGFAP04085 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PDGFAP04085 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDGFAP04085 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PDGFAP04085 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDGFAP04085 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.58■□□□□ 0.24
PDGFAP04085 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDGFAP04085 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDGFAP04085 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDGFAP04085 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.58■□□□□ 0.24
PDGFAP04085 AC098831.1-202ENST00000438821 336 ntBASIC16.58■□□□□ 0.24
PDGFAP04085 MTCL1P1-201ENST00000446207 792 ntBASIC16.58■□□□□ 0.24
PDGFAP04085 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.58■□□□□ 0.24
PDGFAP04085 AC092910.1-201ENST00000482027 1129 ntBASIC16.58■□□□□ 0.24
PDGFAP04085 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.58■□□□□ 0.24
PDGFAP04085 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDGFAP04085 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.58■□□□□ 0.24
PDGFAP04085 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.58■□□□□ 0.24
PDGFAP04085 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.58■□□□□ 0.24
PDGFAP04085 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.58■□□□□ 0.24
PDGFAP04085 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.58■□□□□ 0.24
PDGFAP04085 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDGFAP04085 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.58■□□□□ 0.24
PDGFAP04085 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.58■□□□□ 0.24
PDGFAP04085 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.58■□□□□ 0.24
PDGFAP04085 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDGFAP04085 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDGFAP04085 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDGFAP04085 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.58■□□□□ 0.24
PDGFAP04085 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PDGFAP04085 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDGFAP04085 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PDGFAP04085 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDGFAP04085 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.58■□□□□ 0.24
PDGFAP04085 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PDGFAP04085 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
PDGFAP04085 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDGFAP04085 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PDGFAP04085 BCL2-203ENST00000589955 5011 ntBASIC16.57■□□□□ 0.24
PDGFAP04085 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFAP04085 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PDGFAP04085 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFAP04085 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFAP04085 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.57■□□□□ 0.24
PDGFAP04085 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFAP04085 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFAP04085 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PDGFAP04085 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.57■□□□□ 0.24
PDGFAP04085 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.57■□□□□ 0.24
PDGFAP04085 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFAP04085 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.57■□□□□ 0.24
PDGFAP04085 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFAP04085 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFAP04085 AC125634.1-201ENST00000438758 1403 ntBASIC16.57■□□□□ 0.24
PDGFAP04085 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PDGFAP04085 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFAP04085 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFAP04085 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFAP04085 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.57■□□□□ 0.24
PDGFAP04085 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.57■□□□□ 0.24
PDGFAP04085 MED15P5-201ENST00000423150 992 ntBASIC16.57■□□□□ 0.24
PDGFAP04085 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms