Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CD4P01730 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD4P01730 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CD4P01730 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD4P01730 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CD4P01730 AC087289.5-201ENST00000586076 3175 ntBASIC19.51■□□□□ 0.71
CD4P01730 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD4P01730 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD4P01730 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD4P01730 AL645939.2-201ENST00000427340 991 ntBASIC19.51■□□□□ 0.71
CD4P01730 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.51■□□□□ 0.71
CD4P01730 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.51■□□□□ 0.71
CD4P01730 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.51■□□□□ 0.71
CD4P01730 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CD4P01730 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CD4P01730 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CD4P01730 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CD4P01730 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CD4P01730 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CD4P01730 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD4P01730 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.51■□□□□ 0.71
CD4P01730 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD4P01730 ELL2P1-201ENST00000413990 1906 ntBASIC19.51■□□□□ 0.71
CD4P01730 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CD4P01730 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CD4P01730 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CD4P01730 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.51■□□□□ 0.71
CD4P01730 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CD4P01730 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.5■□□□□ 0.71
CD4P01730 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CD4P01730 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD4P01730 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CD4P01730 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.5■□□□□ 0.71
CD4P01730 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD4P01730 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.5■□□□□ 0.71
CD4P01730 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD4P01730 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CD4P01730 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.5■□□□□ 0.71
CD4P01730 AP002472.1-201ENST00000577490 586 ntBASIC19.5■□□□□ 0.71
CD4P01730 MIR4751-201ENST00000578027 74 ntBASIC19.5■□□□□ 0.71
CD4P01730 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.5■□□□□ 0.71
CD4P01730 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.5■□□□□ 0.71
CD4P01730 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD4P01730 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD4P01730 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD4P01730 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.5■□□□□ 0.71
CD4P01730 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD4P01730 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD4P01730 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CD4P01730 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CD4P01730 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CD4P01730 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD4P01730 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.49■□□□□ 0.71
CD4P01730 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD4P01730 AC132938.5-201ENST00000624980 1813 ntBASIC19.49■□□□□ 0.71
CD4P01730 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD4P01730 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD4P01730 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.49■□□□□ 0.71
CD4P01730 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CD4P01730 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD4P01730 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD4P01730 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD4P01730 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD4P01730 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.49■□□□□ 0.71
CD4P01730 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CD4P01730 RPS15P9-201ENST00000494093 319 ntBASIC19.49■□□□□ 0.71
CD4P01730 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.49■□□□□ 0.71
CD4P01730 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.49■□□□□ 0.71
CD4P01730 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.49■□□□□ 0.71
CD4P01730 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CD4P01730 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.49■□□□□ 0.71
CD4P01730 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.49■□□□□ 0.71
CD4P01730 AL078644.1-201ENST00000609881 752 ntBASIC19.49■□□□□ 0.71
CD4P01730 AC148477.5-201ENST00000625164 1645 ntBASIC19.49■□□□□ 0.71
CD4P01730 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD4P01730 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CD4P01730 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CD4P01730 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD4P01730 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD4P01730 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD4P01730 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CD4P01730 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD4P01730 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD4P01730 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.49■□□□□ 0.71
CD4P01730 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.49■□□□□ 0.71
CD4P01730 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD4P01730 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD4P01730 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.49■□□□□ 0.71
CD4P01730 AL049757.1-201ENST00000616842 1596 ntBASIC19.49■□□□□ 0.71
CD4P01730 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.48■□□□□ 0.71
CD4P01730 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.48■□□□□ 0.71
CD4P01730 GPR89P-201ENST00000407924 1495 ntBASIC19.48■□□□□ 0.71
CD4P01730 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD4P01730 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD4P01730 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD4P01730 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD4P01730 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD4P01730 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.48■□□□□ 0.71
CD4P01730 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD4P01730 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms