Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HERC2O95714 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HERC2O95714 TEX28P1-201ENST00000613479 1221 ntBASIC10.8□□□□□ -0.68
HERC2O95714 TEX28P2-201ENST00000617764 1221 ntBASIC10.8□□□□□ -0.68
HERC2O95714 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HERC2O95714 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC10.8□□□□□ -0.68
HERC2O95714 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
HERC2O95714 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC10.8□□□□□ -0.68
HERC2O95714 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HERC2O95714 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HERC2O95714 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC10.8□□□□□ -0.68
HERC2O95714 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC10.8□□□□□ -0.68
HERC2O95714 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC10.8□□□□□ -0.68
HERC2O95714 MYCLP2-201ENST00000449268 967 ntBASIC10.8□□□□□ -0.68
HERC2O95714 THTPA-204ENST00000554970 569 ntTSL 4 BASIC10.8□□□□□ -0.68
HERC2O95714 THTPA-206ENST00000556015 535 ntTSL 3 BASIC10.8□□□□□ -0.68
HERC2O95714 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HERC2O95714 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC10.8□□□□□ -0.68
HERC2O95714 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HERC2O95714 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HERC2O95714 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HERC2O95714 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HERC2O95714 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HERC2O95714 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC10.8□□□□□ -0.68
HERC2O95714 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
HERC2O95714 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
HERC2O95714 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC10.8□□□□□ -0.68
HERC2O95714 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
HERC2O95714 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HERC2O95714 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC10.8□□□□□ -0.68
HERC2O95714 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HERC2O95714 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
HERC2O95714 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC10.79□□□□□ -0.68
HERC2O95714 SLC25A6P2-201ENST00000497974 877 ntBASIC10.79□□□□□ -0.68
HERC2O95714 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC10.79□□□□□ -0.68
HERC2O95714 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC10.79□□□□□ -0.68
HERC2O95714 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC10.79□□□□□ -0.68
HERC2O95714 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC10.79□□□□□ -0.68
HERC2O95714 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HERC2O95714 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HERC2O95714 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HERC2O95714 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HERC2O95714 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC10.79□□□□□ -0.68
HERC2O95714 AC109635.5-201ENST00000533593 962 ntBASIC10.79□□□□□ -0.68
HERC2O95714 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC10.79□□□□□ -0.68
HERC2O95714 AC015936.2-201ENST00000593177 259 ntBASIC10.79□□□□□ -0.68
HERC2O95714 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC10.79□□□□□ -0.68
HERC2O95714 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC10.79□□□□□ -0.68
HERC2O95714 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
HERC2O95714 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC10.79□□□□□ -0.68
HERC2O95714 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HERC2O95714 SNX21-203ENST00000372541 771 ntTSL 2 BASIC10.79□□□□□ -0.68
HERC2O95714 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
HERC2O95714 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HERC2O95714 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HERC2O95714 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HERC2O95714 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC10.79□□□□□ -0.68
HERC2O95714 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC10.79□□□□□ -0.68
HERC2O95714 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
HERC2O95714 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC10.79□□□□□ -0.68
HERC2O95714 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC10.79□□□□□ -0.68
HERC2O95714 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HERC2O95714 AKAP8P1-201ENST00000434743 1349 ntBASIC10.79□□□□□ -0.68
HERC2O95714 AC087499.5-201ENST00000452760 1342 ntBASIC10.79□□□□□ -0.68
HERC2O95714 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HERC2O95714 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC10.78□□□□□ -0.68
HERC2O95714 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
HERC2O95714 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC10.78□□□□□ -0.68
HERC2O95714 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
HERC2O95714 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC10.78□□□□□ -0.68
HERC2O95714 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC10.78□□□□□ -0.68
HERC2O95714 DOC2GP-202ENST00000514950 1163 ntBASIC10.78□□□□□ -0.68
HERC2O95714 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
HERC2O95714 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC10.78□□□□□ -0.68
HERC2O95714 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
HERC2O95714 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC10.78□□□□□ -0.68
HERC2O95714 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
HERC2O95714 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC10.78□□□□□ -0.68
HERC2O95714 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
HERC2O95714 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
HERC2O95714 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms