Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF40AO75400 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF40AO75400 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF40AO75400 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF40AO75400 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PRPF40AO75400 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF40AO75400 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF40AO75400 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF40AO75400 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.65■□□□□ 0.9
PRPF40AO75400 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.65■□□□□ 0.9
PRPF40AO75400 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.65■□□□□ 0.9
PRPF40AO75400 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.65■□□□□ 0.9
PRPF40AO75400 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.65■□□□□ 0.9
PRPF40AO75400 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.65■□□□□ 0.9
PRPF40AO75400 AC133561.5-201ENST00000635547 218 ntBASIC20.65■□□□□ 0.9
PRPF40AO75400 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF40AO75400 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF40AO75400 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF40AO75400 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF40AO75400 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF40AO75400 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PRPF40AO75400 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.65■□□□□ 0.9
PRPF40AO75400 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
PRPF40AO75400 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PRPF40AO75400 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
PRPF40AO75400 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRPF40AO75400 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.64■□□□□ 0.9
PRPF40AO75400 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
PRPF40AO75400 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.64■□□□□ 0.9
PRPF40AO75400 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PRPF40AO75400 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
PRPF40AO75400 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
PRPF40AO75400 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF40AO75400 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF40AO75400 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF40AO75400 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF40AO75400 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF40AO75400 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF40AO75400 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF40AO75400 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF40AO75400 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF40AO75400 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF40AO75400 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF40AO75400 AC104390.1-201ENST00000555663 520 ntBASIC20.64■□□□□ 0.89
PRPF40AO75400 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.64■□□□□ 0.89
PRPF40AO75400 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
PRPF40AO75400 LINC01023-201ENST00000606054 436 ntBASIC20.64■□□□□ 0.89
PRPF40AO75400 CR769767.2-201ENST00000622735 460 ntBASIC20.64■□□□□ 0.89
PRPF40AO75400 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.64■□□□□ 0.89
PRPF40AO75400 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF40AO75400 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF40AO75400 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF40AO75400 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PRPF40AO75400 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.64■□□□□ 0.89
PRPF40AO75400 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF40AO75400 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PRPF40AO75400 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.64■□□□□ 0.89
PRPF40AO75400 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PRPF40AO75400 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.63■□□□□ 0.89
PRPF40AO75400 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
PRPF40AO75400 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 MMP23A-201ENST00000234610 1017 ntBASIC20.63■□□□□ 0.89
PRPF40AO75400 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 FITM1-202ENST00000559294 800 ntBASIC20.63■□□□□ 0.89
PRPF40AO75400 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.63■□□□□ 0.89
PRPF40AO75400 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PRPF40AO75400 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.63■□□□□ 0.89
PRPF40AO75400 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC20.63■□□□□ 0.89
PRPF40AO75400 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PRPF40AO75400 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PRPF40AO75400 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF40AO75400 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRPF40AO75400 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRPF40AO75400 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRPF40AO75400 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.62■□□□□ 0.89
PRPF40AO75400 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.62■□□□□ 0.89
PRPF40AO75400 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRPF40AO75400 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
PRPF40AO75400 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PRPF40AO75400 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms