Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
SSNA1O43805 AC093010.1-201ENST00000473625 1624 ntBASIC15.14■□□□□ 0.01
SSNA1O43805 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SSNA1O43805 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSNA1O43805 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.13■□□□□ 0.01
SSNA1O43805 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.13■□□□□ 0.01
SSNA1O43805 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.13■□□□□ 0.01
SSNA1O43805 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.13■□□□□ 0.01
SSNA1O43805 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SSNA1O43805 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
SSNA1O43805 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.13■□□□□ 0.01
SSNA1O43805 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSNA1O43805 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SSNA1O43805 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.13■□□□□ 0.01
SSNA1O43805 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SSNA1O43805 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSNA1O43805 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SSNA1O43805 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSNA1O43805 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.13■□□□□ 0.01
SSNA1O43805 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.13■□□□□ 0.01
SSNA1O43805 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSNA1O43805 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
SSNA1O43805 SUDS3P1-201ENST00000505831 966 ntBASIC15.13■□□□□ 0.01
SSNA1O43805 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.13■□□□□ 0.01
SSNA1O43805 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
SSNA1O43805 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.13■□□□□ 0.01
SSNA1O43805 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
SSNA1O43805 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.13■□□□□ 0.01
SSNA1O43805 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.13■□□□□ 0.01
SSNA1O43805 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.13■□□□□ 0.01
SSNA1O43805 AC007950.2-201ENST00000615045 2347 ntBASIC15.13■□□□□ 0.01
SSNA1O43805 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSNA1O43805 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSNA1O43805 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SSNA1O43805 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSNA1O43805 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSNA1O43805 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSNA1O43805 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SSNA1O43805 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SSNA1O43805 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSNA1O43805 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SSNA1O43805 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SSNA1O43805 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSNA1O43805 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSNA1O43805 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SSNA1O43805 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SSNA1O43805 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.12■□□□□ 0.01
SSNA1O43805 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSNA1O43805 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSNA1O43805 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSNA1O43805 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSNA1O43805 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSNA1O43805 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SSNA1O43805 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSNA1O43805 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.12■□□□□ 0.01
SSNA1O43805 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.12■□□□□ 0.01
SSNA1O43805 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SSNA1O43805 CNN2P6-201ENST00000439038 900 ntBASIC15.12■□□□□ 0.01
SSNA1O43805 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SSNA1O43805 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.12■□□□□ 0.01
SSNA1O43805 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.12■□□□□ 0.01
SSNA1O43805 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SSNA1O43805 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC15.12■□□□□ 0.01
SSNA1O43805 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSNA1O43805 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSNA1O43805 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.12■□□□□ 0.01
SSNA1O43805 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.12■□□□□ 0.01
SSNA1O43805 KRT18P61-201ENST00000585825 1298 ntBASIC15.12■□□□□ 0.01
SSNA1O43805 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.12■□□□□ 0.01
SSNA1O43805 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSNA1O43805 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSNA1O43805 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SSNA1O43805 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.12■□□□□ 0.01
SSNA1O43805 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.12■□□□□ 0.01
SSNA1O43805 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSNA1O43805 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSNA1O43805 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSNA1O43805 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
SSNA1O43805 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.12■□□□□ 0.01
SSNA1O43805 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSNA1O43805 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.12■□□□□ 0.01
SSNA1O43805 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SSNA1O43805 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
SSNA1O43805 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.11■□□□□ 0.01
SSNA1O43805 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms