Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 AC125634.1-201ENST00000438758 1403 ntBASIC15.81■□□□□ 0.12
TRAF3IP2O43734 AC091607.1-201ENST00000490318 1060 ntBASIC15.81■□□□□ 0.12
TRAF3IP2O43734 AC010460.3-201ENST00000511359 1579 ntBASIC15.81■□□□□ 0.12
TRAF3IP2O43734 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 AC011840.4-201ENST00000578471 627 ntBASIC15.81■□□□□ 0.12
TRAF3IP2O43734 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 AC026471.1-201ENST00000564629 3026 ntBASIC15.81■□□□□ 0.12
TRAF3IP2O43734 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.8■□□□□ 0.12
TRAF3IP2O43734 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 KRT18P1-202ENST00000452408 1331 ntBASIC15.8■□□□□ 0.12
TRAF3IP2O43734 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 DRAXINP1-201ENST00000437611 948 ntBASIC15.8■□□□□ 0.12
TRAF3IP2O43734 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 TPSP2-201ENST00000561760 610 ntBASIC15.8■□□□□ 0.12
TRAF3IP2O43734 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 AP005901.3-202ENST00000581653 237 ntBASIC15.8■□□□□ 0.12
TRAF3IP2O43734 AP002414.4-201ENST00000589764 1148 ntBASIC15.8■□□□□ 0.12
TRAF3IP2O43734 AL138831.2-201ENST00000606564 490 ntBASIC15.8■□□□□ 0.12
TRAF3IP2O43734 AC069148.1-201ENST00000608741 768 ntBASIC15.8■□□□□ 0.12
TRAF3IP2O43734 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAF3IP2O43734 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 LETM1P2-201ENST00000597330 2178 ntBASIC15.79■□□□□ 0.12
TRAF3IP2O43734 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 VENTXP7-201ENST00000475503 772 ntBASIC15.79■□□□□ 0.12
TRAF3IP2O43734 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 NPAP1P7-201ENST00000613027 823 ntBASIC15.79■□□□□ 0.12
TRAF3IP2O43734 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.79■□□□□ 0.12
TRAF3IP2O43734 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 HLA-J-201ENST00000462773 1622 ntBASIC15.79■□□□□ 0.12
TRAF3IP2O43734 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms