Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.97■□□□□ 0.47
KDELR3O43731 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KDELR3O43731 AL353593.2-201ENST00000602529 1483 ntBASIC17.97■□□□□ 0.47
KDELR3O43731 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KDELR3O43731 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.97■□□□□ 0.47
KDELR3O43731 AC106795.1-205ENST00000512851 1056 ntBASIC17.97■□□□□ 0.47
KDELR3O43731 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.97■□□□□ 0.47
KDELR3O43731 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.97■□□□□ 0.47
KDELR3O43731 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.97■□□□□ 0.47
KDELR3O43731 AP001269.4-201ENST00000609611 512 ntBASIC17.97■□□□□ 0.47
KDELR3O43731 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KDELR3O43731 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KDELR3O43731 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KDELR3O43731 BCL2-203ENST00000589955 5011 ntBASIC17.97■□□□□ 0.47
KDELR3O43731 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.97■□□□□ 0.47
KDELR3O43731 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.97■□□□□ 0.47
KDELR3O43731 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
KDELR3O43731 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KDELR3O43731 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KDELR3O43731 AC134043.2-201ENST00000624206 2238 ntBASIC17.96■□□□□ 0.47
KDELR3O43731 AC018470.1-201ENST00000624790 3129 ntBASIC17.96■□□□□ 0.47
KDELR3O43731 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
KDELR3O43731 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
KDELR3O43731 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
KDELR3O43731 PMPCAP1-201ENST00000508114 1576 ntBASIC17.96■□□□□ 0.47
KDELR3O43731 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.96■□□□□ 0.47
KDELR3O43731 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.96■□□□□ 0.47
KDELR3O43731 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
KDELR3O43731 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
KDELR3O43731 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
KDELR3O43731 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
KDELR3O43731 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KDELR3O43731 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KDELR3O43731 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.96■□□□□ 0.47
KDELR3O43731 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KDELR3O43731 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
KDELR3O43731 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.96■□□□□ 0.47
KDELR3O43731 RBM17P3-201ENST00000417687 1192 ntBASIC17.96■□□□□ 0.47
KDELR3O43731 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.96■□□□□ 0.47
KDELR3O43731 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.96■□□□□ 0.47
KDELR3O43731 SAPCD2P3-201ENST00000455031 850 ntBASIC17.96■□□□□ 0.47
KDELR3O43731 IGHV3-52-201ENST00000519770 353 ntBASIC17.96■□□□□ 0.47
KDELR3O43731 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
KDELR3O43731 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KDELR3O43731 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KDELR3O43731 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KDELR3O43731 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KDELR3O43731 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KDELR3O43731 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KDELR3O43731 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KDELR3O43731 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
KDELR3O43731 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
KDELR3O43731 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
KDELR3O43731 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
KDELR3O43731 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KDELR3O43731 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
KDELR3O43731 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KDELR3O43731 LINC00304-203ENST00000565008 1864 ntBASIC17.95■□□□□ 0.46
KDELR3O43731 AC068880.1-201ENST00000507289 2297 ntBASIC17.95■□□□□ 0.46
KDELR3O43731 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KDELR3O43731 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.95■□□□□ 0.46
KDELR3O43731 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KDELR3O43731 AC004870.1-201ENST00000315132 882 ntBASIC17.95■□□□□ 0.46
KDELR3O43731 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KDELR3O43731 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KDELR3O43731 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.95■□□□□ 0.46
KDELR3O43731 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.95■□□□□ 0.46
KDELR3O43731 AF238378.1-201ENST00000526806 358 ntBASIC17.95■□□□□ 0.46
KDELR3O43731 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
KDELR3O43731 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.95■□□□□ 0.46
KDELR3O43731 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
KDELR3O43731 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.95■□□□□ 0.46
KDELR3O43731 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KDELR3O43731 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KDELR3O43731 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KDELR3O43731 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KDELR3O43731 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
KDELR3O43731 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.95■□□□□ 0.46
KDELR3O43731 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KDELR3O43731 GNAS-203ENST00000306120 1878 ntBASIC17.95■□□□□ 0.46
KDELR3O43731 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KDELR3O43731 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDELR3O43731 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDELR3O43731 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDELR3O43731 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
KDELR3O43731 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
KDELR3O43731 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
KDELR3O43731 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.94■□□□□ 0.46
KDELR3O43731 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDELR3O43731 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.94■□□□□ 0.46
KDELR3O43731 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.94■□□□□ 0.46
KDELR3O43731 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDELR3O43731 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDELR3O43731 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KDELR3O43731 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.94■□□□□ 0.46
KDELR3O43731 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.94■□□□□ 0.46
KDELR3O43731 TPM4P1-201ENST00000436100 807 ntBASIC17.94■□□□□ 0.46
KDELR3O43731 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
KDELR3O43731 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KDELR3O43731 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms