Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSI1O43347 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSI1O43347 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.41■□□□□ 0.54
MSI1O43347 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.41■□□□□ 0.54
MSI1O43347 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSI1O43347 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.41■□□□□ 0.54
MSI1O43347 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSI1O43347 AC138932.1-201ENST00000534164 6830 ntBASIC18.41■□□□□ 0.54
MSI1O43347 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MSI1O43347 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSI1O43347 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.41■□□□□ 0.54
MSI1O43347 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MSI1O43347 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MSI1O43347 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MSI1O43347 COX5BP2-201ENST00000392354 334 ntBASIC18.41■□□□□ 0.54
MSI1O43347 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.41■□□□□ 0.54
MSI1O43347 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSI1O43347 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
MSI1O43347 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
MSI1O43347 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.41■□□□□ 0.54
MSI1O43347 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.41■□□□□ 0.54
MSI1O43347 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MSI1O43347 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.41■□□□□ 0.54
MSI1O43347 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MSI1O43347 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.41■□□□□ 0.54
MSI1O43347 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.41■□□□□ 0.54
MSI1O43347 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MSI1O43347 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.41■□□□□ 0.54
MSI1O43347 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSI1O43347 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSI1O43347 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.41■□□□□ 0.54
MSI1O43347 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSI1O43347 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSI1O43347 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.4■□□□□ 0.54
MSI1O43347 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSI1O43347 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
MSI1O43347 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MSI1O43347 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSI1O43347 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.4■□□□□ 0.54
MSI1O43347 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.4■□□□□ 0.54
MSI1O43347 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSI1O43347 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSI1O43347 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MSI1O43347 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSI1O43347 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
MSI1O43347 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSI1O43347 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSI1O43347 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
MSI1O43347 DDX43P3-201ENST00000441064 443 ntBASIC18.4■□□□□ 0.54
MSI1O43347 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.4■□□□□ 0.54
MSI1O43347 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.4■□□□□ 0.54
MSI1O43347 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.4■□□□□ 0.54
MSI1O43347 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.4■□□□□ 0.54
MSI1O43347 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.4■□□□□ 0.54
MSI1O43347 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSI1O43347 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSI1O43347 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.4■□□□□ 0.54
MSI1O43347 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MSI1O43347 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSI1O43347 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
MSI1O43347 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
MSI1O43347 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.39■□□□□ 0.54
MSI1O43347 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MSI1O43347 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.39■□□□□ 0.53
MSI1O43347 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
MSI1O43347 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MSI1O43347 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
MSI1O43347 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MSI1O43347 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MSI1O43347 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MSI1O43347 FAAHP1-202ENST00000446499 1238 ntBASIC18.39■□□□□ 0.53
MSI1O43347 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.39■□□□□ 0.53
MSI1O43347 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MSI1O43347 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.39■□□□□ 0.53
MSI1O43347 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
MSI1O43347 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.39■□□□□ 0.53
MSI1O43347 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
MSI1O43347 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MSI1O43347 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MSI1O43347 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
MSI1O43347 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MSI1O43347 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.39■□□□□ 0.53
MSI1O43347 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.39■□□□□ 0.53
MSI1O43347 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.39■□□□□ 0.53
MSI1O43347 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
MSI1O43347 AC008764.6-201ENST00000595909 2069 ntBASIC18.38■□□□□ 0.53
MSI1O43347 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MSI1O43347 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
MSI1O43347 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MSI1O43347 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MSI1O43347 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.38■□□□□ 0.53
MSI1O43347 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.38■□□□□ 0.53
MSI1O43347 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MSI1O43347 AC122714.2-201ENST00000502787 707 ntBASIC18.38■□□□□ 0.53
MSI1O43347 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.38■□□□□ 0.53
MSI1O43347 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
MSI1O43347 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.38■□□□□ 0.53
MSI1O43347 AC008608.2-201ENST00000606089 416 ntBASIC18.38■□□□□ 0.53
MSI1O43347 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MSI1O43347 TP73-AS1-207ENST00000624167 988 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms