Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNRC18O15417 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNRC18O15417 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNRC18O15417 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNRC18O15417 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNRC18O15417 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TNRC18O15417 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.04■□□□□ 0.64
TNRC18O15417 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.04■□□□□ 0.64
TNRC18O15417 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNRC18O15417 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.04■□□□□ 0.64
TNRC18O15417 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNRC18O15417 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.04■□□□□ 0.64
TNRC18O15417 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
TNRC18O15417 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
TNRC18O15417 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.04■□□□□ 0.64
TNRC18O15417 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNRC18O15417 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNRC18O15417 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.04■□□□□ 0.64
TNRC18O15417 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.04■□□□□ 0.64
TNRC18O15417 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNRC18O15417 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNRC18O15417 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.04■□□□□ 0.64
TNRC18O15417 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.04■□□□□ 0.64
TNRC18O15417 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.04■□□□□ 0.64
TNRC18O15417 AC008738.7-201ENST00000609744 511 ntBASIC19.04■□□□□ 0.64
TNRC18O15417 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TNRC18O15417 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TNRC18O15417 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNRC18O15417 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNRC18O15417 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNRC18O15417 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNRC18O15417 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.03■□□□□ 0.64
TNRC18O15417 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TNRC18O15417 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNRC18O15417 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.03■□□□□ 0.64
TNRC18O15417 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNRC18O15417 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.03■□□□□ 0.64
TNRC18O15417 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.03■□□□□ 0.64
TNRC18O15417 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.03■□□□□ 0.64
TNRC18O15417 MIR4706-201ENST00000582134 82 ntBASIC19.03■□□□□ 0.64
TNRC18O15417 TUBB1P2-201ENST00000422712 1306 ntBASIC19.03■□□□□ 0.64
TNRC18O15417 TUBB1P1-201ENST00000503144 1300 ntBASIC19.03■□□□□ 0.64
TNRC18O15417 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.03■□□□□ 0.64
TNRC18O15417 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNRC18O15417 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNRC18O15417 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNRC18O15417 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNRC18O15417 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNRC18O15417 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.02■□□□□ 0.64
TNRC18O15417 AC104457.1-201ENST00000401024 814 ntBASIC19.02■□□□□ 0.64
TNRC18O15417 LBH-202ENST00000401506 485 ntTSL 3 BASIC19.02■□□□□ 0.64
TNRC18O15417 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TNRC18O15417 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.02■□□□□ 0.64
TNRC18O15417 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.02■□□□□ 0.64
TNRC18O15417 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.02■□□□□ 0.64
TNRC18O15417 RN7SL219P-201ENST00000582872 296 ntBASIC19.02■□□□□ 0.64
TNRC18O15417 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC19.02■□□□□ 0.64
TNRC18O15417 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.02■□□□□ 0.64
TNRC18O15417 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TNRC18O15417 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNRC18O15417 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNRC18O15417 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNRC18O15417 AC097637.2-201ENST00000624096 1997 ntBASIC19.02■□□□□ 0.64
TNRC18O15417 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.02■□□□□ 0.64
TNRC18O15417 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.02■□□□□ 0.64
TNRC18O15417 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNRC18O15417 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.02■□□□□ 0.64
TNRC18O15417 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.02■□□□□ 0.64
TNRC18O15417 FP475955.4-201ENST00000623131 1990 ntBASIC19.02■□□□□ 0.64
TNRC18O15417 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNRC18O15417 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNRC18O15417 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNRC18O15417 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TNRC18O15417 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TNRC18O15417 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
TNRC18O15417 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TNRC18O15417 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.02■□□□□ 0.63
TNRC18O15417 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.02■□□□□ 0.63
TNRC18O15417 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TNRC18O15417 BRWD1P1-201ENST00000401091 371 ntBASIC19.02■□□□□ 0.63
TNRC18O15417 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.02■□□□□ 0.63
TNRC18O15417 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TNRC18O15417 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.02■□□□□ 0.63
TNRC18O15417 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.02■□□□□ 0.63
TNRC18O15417 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.02■□□□□ 0.63
TNRC18O15417 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.63
TNRC18O15417 MIR3615-201ENST00000581999 87 ntBASIC19.02■□□□□ 0.63
TNRC18O15417 AC018445.3-201ENST00000624177 1945 ntBASIC19.02■□□□□ 0.63
TNRC18O15417 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC19.02■□□□□ 0.63
TNRC18O15417 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.01■□□□□ 0.63
TNRC18O15417 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNRC18O15417 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.01■□□□□ 0.63
TNRC18O15417 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
TNRC18O15417 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.01■□□□□ 0.63
TNRC18O15417 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.01■□□□□ 0.63
TNRC18O15417 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.01■□□□□ 0.63
TNRC18O15417 AC243960.2-201ENST00000600996 747 ntBASIC19.01■□□□□ 0.63
TNRC18O15417 AC093677.2-201ENST00000600169 1863 ntBASIC19.01■□□□□ 0.63
TNRC18O15417 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNRC18O15417 MIR1247-201ENST00000408206 136 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms