Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 AC012618.2-201ENST00000428058 849 ntBASIC16.42■□□□□ 0.22
TNFRSF11BO00300 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 FAM201B-201ENST00000458407 597 ntBASIC16.42■□□□□ 0.22
TNFRSF11BO00300 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 AC233702.5-201ENST00000584107 538 ntBASIC16.42■□□□□ 0.22
TNFRSF11BO00300 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 AC116562.4-202ENST00000641738 218 ntBASIC16.42■□□□□ 0.22
TNFRSF11BO00300 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.42■□□□□ 0.22
TNFRSF11BO00300 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 AC007663.1-201ENST00000438948 1240 ntBASIC16.41■□□□□ 0.22
TNFRSF11BO00300 SEC1P-202ENST00000473944 940 ntBASIC16.41■□□□□ 0.22
TNFRSF11BO00300 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.41■□□□□ 0.22
TNFRSF11BO00300 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.41■□□□□ 0.22
TNFRSF11BO00300 FER1L4-210ENST00000615531 5998 ntBASIC16.41■□□□□ 0.22
TNFRSF11BO00300 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 AC106886.4-201ENST00000623557 2502 ntBASIC16.4■□□□□ 0.22
TNFRSF11BO00300 UNC93B2-201ENST00000285383 730 ntBASIC16.4■□□□□ 0.22
TNFRSF11BO00300 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 DDX43P3-201ENST00000441064 443 ntBASIC16.4■□□□□ 0.22
TNFRSF11BO00300 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 AC142381.4-202ENST00000563973 229 ntBASIC16.4■□□□□ 0.22
TNFRSF11BO00300 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 AC024243.1-201ENST00000609234 778 ntBASIC16.4■□□□□ 0.22
TNFRSF11BO00300 ITM2C-210ENST00000620962 501 ntBASIC16.4■□□□□ 0.22
TNFRSF11BO00300 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.4■□□□□ 0.22
TNFRSF11BO00300 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms