Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 LINC01126-201ENST00000623515 1646 ntBASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 KRT8P9-201ENST00000558927 1449 ntBASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 NAPSB-206ENST00000562112 1266 ntBASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 AC010240.3-201ENST00000607688 395 ntBASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 AC006116.8-202ENST00000587620 1550 ntBASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 AC093010.1-201ENST00000473625 1624 ntBASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF103-CHMP3A0A140T963 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 AC010947.1-201ENST00000623454 693 ntBASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF103-CHMP3A0A140T963 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 AC009947.2-201ENST00000444014 672 ntBASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 AL118508.1-201ENST00000613502 2345 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms