Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 PCDHA14-201ENST00000506751 2298 ntBASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 PVRIG2P-201ENST00000435460 978 ntBASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 MST1L-201ENST00000442552 2185 ntBASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-7A0A0A0MS04 LINC00304-203ENST00000565008 1864 ntBASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 SNORA78-201ENST00000459373 127 ntBASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 AC116407.2-201ENST00000613639 860 ntBASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 CYP2D8P-201ENST00000433633 1490 ntBASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 AL356309.3-201ENST00000624132 1934 ntBASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRBV6-7A0A0A0MS04 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 HLA-J-201ENST00000462773 1622 ntBASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 AC113404.2-201ENST00000507884 177 ntBASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms