Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN6Q9Y6Q1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CAPN6Q9Y6Q1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CAPN6Q9Y6Q1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CAPN6Q9Y6Q1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.81■□□□□ 0.6
CAPN6Q9Y6Q1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CAPN6Q9Y6Q1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.81■□□□□ 0.6
CAPN6Q9Y6Q1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CAPN6Q9Y6Q1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN6Q9Y6Q1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.81■□□□□ 0.6
CAPN6Q9Y6Q1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN6Q9Y6Q1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.81■□□□□ 0.6
CAPN6Q9Y6Q1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN6Q9Y6Q1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN6Q9Y6Q1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CAPN6Q9Y6Q1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN6Q9Y6Q1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 FAM87A-204ENST00000613235 858 ntBASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.8■□□□□ 0.6
CAPN6Q9Y6Q1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 PCDHA14-201ENST00000506751 2298 ntBASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 KRT18P65-201ENST00000439811 1286 ntBASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 AC008550.1-201ENST00000511500 884 ntBASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 NEK4P2-201ENST00000580004 1012 ntBASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
CAPN6Q9Y6Q1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 FLJ38576-201ENST00000623820 2459 ntBASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 AC010947.1-201ENST00000623454 693 ntBASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN6Q9Y6Q1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms