Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHGB1Q9Y5G3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB1Q9Y5G3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGB1Q9Y5G3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGB1Q9Y5G3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB1Q9Y5G3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB1Q9Y5G3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGB1Q9Y5G3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB1Q9Y5G3 MST1L-201ENST00000442552 2185 ntBASIC16.3■□□□□ 0.2
PCDHGB1Q9Y5G3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB1Q9Y5G3 HLA-J-201ENST00000462773 1622 ntBASIC16.3■□□□□ 0.2
PCDHGB1Q9Y5G3 LINC01126-201ENST00000623515 1646 ntBASIC16.3■□□□□ 0.2
PCDHGB1Q9Y5G3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB1Q9Y5G3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGB1Q9Y5G3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB1Q9Y5G3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB1Q9Y5G3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB1Q9Y5G3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 AC008622.2-201ENST00000617006 1229 ntBASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 AL163051.1-201ENST00000569214 1512 ntBASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB1Q9Y5G3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 AL603756.1-201ENST00000606511 2163 ntBASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 CR392000.1-201ENST00000624770 1228 ntBASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB1Q9Y5G3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 PCDHA1-201ENST00000378133 2726 ntBASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms