Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 LINC01451-201ENST00000623792 534 ntBASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 AC009949.1-201ENST00000623048 1830 ntBASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 INGX-201ENST00000359239 846 ntBASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 AC008550.1-201ENST00000511500 884 ntBASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 AL512604.3-201ENST00000569583 964 ntBASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 AL121761.2-201ENST00000598007 1648 ntBASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPS28Q9Y2Q9 AC084018.2-201ENST00000613093 2607 ntBASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 PVRIG2P-201ENST00000435460 978 ntBASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MRPS28Q9Y2Q9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms