Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 AL353708.3-201ENST00000610272 989 ntBASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 AL023875.1-201ENST00000640777 796 ntBASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 KSR1P1-201ENST00000446298 240 ntBASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 AL137784.2-201ENST00000607332 1000 ntBASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 LINC02199-201ENST00000506655 2702 ntBASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RCL1Q9Y2P8 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 AC132938.6-201ENST00000623828 1655 ntBASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 AC069152.1-201ENST00000438030 544 ntBASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 AP002982.1-201ENST00000492365 877 ntBASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 MIR3180-5-201ENST00000583743 153 ntBASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 AC130371.2-201ENST00000619443 611 ntBASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms