Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 AC009533.2-201ENST00000543664 586 ntBASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 NOC2LP2-201ENST00000407594 1944 ntBASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 RCN1P2-201ENST00000398357 915 ntBASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 IGHV3-22-201ENST00000520721 359 ntBASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 AP001160.2-201ENST00000596071 487 ntBASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 AL356488.2-201ENST00000602755 427 ntBASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 AL354751.1-201ENST00000412768 1863 ntBASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42EP3Q9UKI2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDC42EP3Q9UKI2 AC112777.1-201ENST00000540175 1423 ntBASIC14.83□□□□□ -0.03
CDC42EP3Q9UKI2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDC42EP3Q9UKI2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.83□□□□□ -0.03
CDC42EP3Q9UKI2 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.83□□□□□ -0.03
CDC42EP3Q9UKI2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDC42EP3Q9UKI2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 GPX1P2-201ENST00000429271 606 ntBASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 HNRNPDP1-201ENST00000439535 754 ntBASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 AC040169.1-201ENST00000565382 521 ntBASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 AC010327.4-202ENST00000591484 748 ntBASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 PKD1P1-201ENST00000458669 6805 ntBASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42EP3Q9UKI2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms