Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 BCL2-203ENST00000589955 5011 ntBASIC17.55■□□□□ 0.4
NCDNQ9UBB6 AC006504.4-201ENST00000592118 1568 ntBASIC17.55■□□□□ 0.4
NCDNQ9UBB6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 MRPL20P1-201ENST00000400819 433 ntBASIC17.55■□□□□ 0.4
NCDNQ9UBB6 AC007967.3-201ENST00000434308 558 ntBASIC17.55■□□□□ 0.4
NCDNQ9UBB6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 AC005225.4-201ENST00000557330 545 ntBASIC17.55■□□□□ 0.4
NCDNQ9UBB6 AC087641.1-201ENST00000557561 1021 ntBASIC17.55■□□□□ 0.4
NCDNQ9UBB6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 SIGLEC16-201ENST00000599858 1437 ntBASIC17.55■□□□□ 0.4
NCDNQ9UBB6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCDNQ9UBB6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.54■□□□□ 0.4
NCDNQ9UBB6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 RPS15P9-201ENST00000494093 319 ntBASIC17.54■□□□□ 0.4
NCDNQ9UBB6 TERF1P3-201ENST00000505638 1227 ntBASIC17.54■□□□□ 0.4
NCDNQ9UBB6 IGHV3-65-201ENST00000523210 341 ntBASIC17.54■□□□□ 0.4
NCDNQ9UBB6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 AC008667.4-201ENST00000607370 168 ntBASIC17.54■□□□□ 0.4
NCDNQ9UBB6 LINC00628-201ENST00000628516 1289 ntBASIC17.54■□□□□ 0.4
NCDNQ9UBB6 AL513210.1-201ENST00000629608 234 ntBASIC17.54■□□□□ 0.4
NCDNQ9UBB6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCDNQ9UBB6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 KRT8P47-201ENST00000604727 1398 ntBASIC17.53■□□□□ 0.4
NCDNQ9UBB6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms