Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 GUSBP12-201ENST00000513727 720 ntBASIC16.99■□□□□ 0.31
BRF2Q9HAW0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.98■□□□□ 0.31
BRF2Q9HAW0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
BRF2Q9HAW0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 AC108860.2-201ENST00000562760 2183 ntBASIC16.97■□□□□ 0.31
BRF2Q9HAW0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 AL136038.3-201ENST00000561909 1096 ntBASIC16.97■□□□□ 0.31
BRF2Q9HAW0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BRF2Q9HAW0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.96■□□□□ 0.31
BRF2Q9HAW0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
BRF2Q9HAW0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.96■□□□□ 0.31
BRF2Q9HAW0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BRF2Q9HAW0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
BRF2Q9HAW0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BRF2Q9HAW0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BRF2Q9HAW0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BRF2Q9HAW0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
BRF2Q9HAW0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
BRF2Q9HAW0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.96■□□□□ 0.31
BRF2Q9HAW0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
BRF2Q9HAW0 TSPY22P-201ENST00000427496 604 ntBASIC16.96■□□□□ 0.31
BRF2Q9HAW0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.96■□□□□ 0.31
BRF2Q9HAW0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.96■□□□□ 0.31
BRF2Q9HAW0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.96■□□□□ 0.31
BRF2Q9HAW0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.96■□□□□ 0.31
BRF2Q9HAW0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.96■□□□□ 0.31
BRF2Q9HAW0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.96■□□□□ 0.31
BRF2Q9HAW0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms