Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.08
UPF2Q9HAU5 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC21.83■■□□□ 1.08
UPF2Q9HAU5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 AC092666.2-201ENST00000613287 246 ntBASIC21.82■■□□□ 1.08
UPF2Q9HAU5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPF2Q9HAU5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 AL118508.1-201ENST00000613502 2345 ntBASIC21.81■■□□□ 1.08
UPF2Q9HAU5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 AP003041.3-201ENST00000527151 707 ntBASIC21.81■■□□□ 1.08
UPF2Q9HAU5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 LINC01451-201ENST00000623792 534 ntBASIC21.81■■□□□ 1.08
UPF2Q9HAU5 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
UPF2Q9HAU5 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.8■■□□□ 1.08
UPF2Q9HAU5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 TSPY17P-201ENST00000450329 467 ntBASIC21.8■■□□□ 1.08
UPF2Q9HAU5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UPF2Q9HAU5 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms