Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 AF238378.1-201ENST00000526806 358 ntBASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 AC139530.3-201ENST00000620344 690 ntBASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 AF228730.7-201ENST00000641842 219 ntBASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1BQ9H9Y6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 KRT18P13-201ENST00000400056 1290 ntBASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 MINOS1P3-201ENST00000457048 203 ntBASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 AL773604.1-201ENST00000617417 272 ntBASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 ESPNP-201ENST00000270691 2015 ntBASIC17.59■□□□□ 0.41
POLR1BQ9H9Y6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLR1BQ9H9Y6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
POLR1BQ9H9Y6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLR1BQ9H9Y6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.58■□□□□ 0.41
POLR1BQ9H9Y6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.58■□□□□ 0.41
POLR1BQ9H9Y6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
POLR1BQ9H9Y6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLR1BQ9H9Y6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.58■□□□□ 0.41
POLR1BQ9H9Y6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.58■□□□□ 0.41
POLR1BQ9H9Y6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
POLR1BQ9H9Y6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
POLR1BQ9H9Y6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
POLR1BQ9H9Y6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLR1BQ9H9Y6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLR1BQ9H9Y6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
POLR1BQ9H9Y6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLR1BQ9H9Y6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLR1BQ9H9Y6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 IL9RP2-201ENST00000423948 1312 ntBASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 MIR574-201ENST00000385209 96 ntBASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
POLR1BQ9H9Y6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms