Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTFDC1Q9BY42 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTFDC1Q9BY42 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 WIZP1-201ENST00000531444 2299 ntBASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 AL139400.1-201ENST00000366220 510 ntBASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 MIR770-201ENST00000390219 98 ntBASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTFDC1Q9BY42 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 AC074386.1-202ENST00000463561 864 ntBASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 AC098818.2-201ENST00000564925 2320 ntBASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 AC092364.2-202ENST00000597012 1073 ntBASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTFDC1Q9BY42 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 STK19B-204ENST00000512515 211 ntBASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 AC106028.4-201ENST00000614509 607 ntBASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 BX323043.1-201ENST00000641006 1765 ntBASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.41■■□□□ 1.02
RTFDC1Q9BY42 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 AC009336.1-201ENST00000608941 1553 ntBASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 AC025580.3-201ENST00000617932 1424 ntBASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 FAM58CP-201ENST00000435741 640 ntBASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 AL513210.1-201ENST00000629608 234 ntBASIC21.4■■□□□ 1.02
RTFDC1Q9BY42 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms