Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 EMBP1-201ENST00000458200 901 ntBASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 MIR5100-201ENST00000579544 119 ntBASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 RCN1P2-201ENST00000398357 915 ntBASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 AC026396.1-201ENST00000419388 421 ntBASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 SAPCD2P3-201ENST00000455031 850 ntBASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP3Q9BWW4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms