Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
LITAFQ99732 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LITAFQ99732 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
LITAFQ99732 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LITAFQ99732 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LITAFQ99732 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC11.82□□□□□ -0.52
LITAFQ99732 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
LITAFQ99732 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC11.82□□□□□ -0.52
LITAFQ99732 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC11.82□□□□□ -0.52
LITAFQ99732 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC11.82□□□□□ -0.52
LITAFQ99732 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC11.82□□□□□ -0.52
LITAFQ99732 BET1L-207ENST00000529614 560 ntTSL 5 BASIC11.82□□□□□ -0.52
LITAFQ99732 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC11.82□□□□□ -0.52
LITAFQ99732 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 AL050303.2-201ENST00000619798 666 ntBASIC11.82□□□□□ -0.52
LITAFQ99732 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LITAFQ99732 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LITAFQ99732 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC11.82□□□□□ -0.52
LITAFQ99732 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LITAFQ99732 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
LITAFQ99732 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC11.82□□□□□ -0.52
LITAFQ99732 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
LITAFQ99732 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LITAFQ99732 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC11.82□□□□□ -0.52
LITAFQ99732 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
LITAFQ99732 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 AC104640.1-201ENST00000562617 2109 ntBASIC11.81□□□□□ -0.52
LITAFQ99732 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC11.81□□□□□ -0.52
LITAFQ99732 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
LITAFQ99732 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC11.81□□□□□ -0.52
LITAFQ99732 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
LITAFQ99732 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
LITAFQ99732 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC11.81□□□□□ -0.52
LITAFQ99732 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC11.81□□□□□ -0.52
LITAFQ99732 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC11.81□□□□□ -0.52
LITAFQ99732 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC11.81□□□□□ -0.52
LITAFQ99732 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 POM121L13P-201ENST00000422362 380 ntBASIC11.81□□□□□ -0.52
LITAFQ99732 KRT18P5-201ENST00000436075 1291 ntBASIC11.81□□□□□ -0.52
LITAFQ99732 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC11.81□□□□□ -0.52
LITAFQ99732 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC11.81□□□□□ -0.52
LITAFQ99732 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
LITAFQ99732 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC11.81□□□□□ -0.52
LITAFQ99732 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC11.81□□□□□ -0.52
LITAFQ99732 AL365203.3-201ENST00000609742 2057 ntBASIC11.81□□□□□ -0.52
LITAFQ99732 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC11.81□□□□□ -0.52
LITAFQ99732 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC11.81□□□□□ -0.52
LITAFQ99732 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
LITAFQ99732 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
LITAFQ99732 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
LITAFQ99732 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC11.81□□□□□ -0.52
LITAFQ99732 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LITAFQ99732 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms