Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 AC105036.2-201ENST00000569468 176 ntBASIC16.73■□□□□ 0.27
NR1H4Q96RI1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H4Q96RI1 TSPY26P-202ENST00000565928 3884 ntBASIC16.72■□□□□ 0.27
NR1H4Q96RI1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 KRT8P3-201ENST00000519669 1449 ntBASIC16.72■□□□□ 0.27
NR1H4Q96RI1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NR1H4Q96RI1 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 BX276092.2-201ENST00000417668 665 ntBASIC16.71■□□□□ 0.27
NR1H4Q96RI1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 AF201337.1-201ENST00000520239 748 ntBASIC16.71■□□□□ 0.27
NR1H4Q96RI1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms