Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.27■□□□□ 0.36
CFAP54Q96N23 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CFAP54Q96N23 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CFAP54Q96N23 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CFAP54Q96N23 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CFAP54Q96N23 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CFAP54Q96N23 TREML5P-201ENST00000421694 576 ntBASIC17.27■□□□□ 0.36
CFAP54Q96N23 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.27■□□□□ 0.36
CFAP54Q96N23 GIMAP3P-201ENST00000495150 836 ntBASIC17.27■□□□□ 0.36
CFAP54Q96N23 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.27■□□□□ 0.36
CFAP54Q96N23 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CFAP54Q96N23 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CFAP54Q96N23 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.27■□□□□ 0.36
CFAP54Q96N23 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CFAP54Q96N23 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.27■□□□□ 0.35
CFAP54Q96N23 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CFAP54Q96N23 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CFAP54Q96N23 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
CFAP54Q96N23 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CFAP54Q96N23 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CFAP54Q96N23 AC097493.3-201ENST00000509725 367 ntBASIC17.27■□□□□ 0.35
CFAP54Q96N23 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CFAP54Q96N23 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.27■□□□□ 0.35
CFAP54Q96N23 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP54Q96N23 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CFAP54Q96N23 KRT8P47-201ENST00000604727 1398 ntBASIC17.26■□□□□ 0.35
CFAP54Q96N23 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.26■□□□□ 0.35
CFAP54Q96N23 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.26■□□□□ 0.35
CFAP54Q96N23 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CFAP54Q96N23 AC141586.3-201ENST00000562166 1838 ntBASIC17.26■□□□□ 0.35
CFAP54Q96N23 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP54Q96N23 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP54Q96N23 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CFAP54Q96N23 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP54Q96N23 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP54Q96N23 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP54Q96N23 KRT18P32-201ENST00000424695 1287 ntBASIC17.26■□□□□ 0.35
CFAP54Q96N23 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.26■□□□□ 0.35
CFAP54Q96N23 MTCL1P1-201ENST00000446207 792 ntBASIC17.26■□□□□ 0.35
CFAP54Q96N23 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP54Q96N23 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP54Q96N23 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP54Q96N23 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.26■□□□□ 0.35
CFAP54Q96N23 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.26■□□□□ 0.35
CFAP54Q96N23 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CFAP54Q96N23 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.26■□□□□ 0.35
CFAP54Q96N23 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.26■□□□□ 0.35
CFAP54Q96N23 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.26■□□□□ 0.35
CFAP54Q96N23 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP54Q96N23 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.26■□□□□ 0.35
CFAP54Q96N23 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CFAP54Q96N23 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.26■□□□□ 0.35
CFAP54Q96N23 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.26■□□□□ 0.35
CFAP54Q96N23 AC140878.1-201ENST00000565277 250 ntBASIC17.26■□□□□ 0.35
CFAP54Q96N23 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.26■□□□□ 0.35
CFAP54Q96N23 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CFAP54Q96N23 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
CFAP54Q96N23 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.25■□□□□ 0.35
CFAP54Q96N23 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CFAP54Q96N23 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP54Q96N23 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP54Q96N23 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP54Q96N23 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CFAP54Q96N23 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.25■□□□□ 0.35
CFAP54Q96N23 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CFAP54Q96N23 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.25■□□□□ 0.35
CFAP54Q96N23 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.25■□□□□ 0.35
CFAP54Q96N23 AC023141.13-201ENST00000604991 943 ntBASIC17.25■□□□□ 0.35
CFAP54Q96N23 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP54Q96N23 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP54Q96N23 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP54Q96N23 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP54Q96N23 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.25■□□□□ 0.35
CFAP54Q96N23 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP54Q96N23 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP54Q96N23 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP54Q96N23 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP54Q96N23 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.25■□□□□ 0.35
CFAP54Q96N23 FAM8A2P-201ENST00000528813 1142 ntBASIC17.25■□□□□ 0.35
CFAP54Q96N23 AC092552.1-201ENST00000547243 906 ntBASIC17.25■□□□□ 0.35
CFAP54Q96N23 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.25■□□□□ 0.35
CFAP54Q96N23 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CFAP54Q96N23 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.25■□□□□ 0.35
CFAP54Q96N23 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP54Q96N23 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP54Q96N23 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP54Q96N23 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP54Q96N23 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CFAP54Q96N23 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFAP54Q96N23 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFAP54Q96N23 MIR658-201ENST00000385210 100 ntBASIC17.24■□□□□ 0.35
CFAP54Q96N23 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.24■□□□□ 0.35
CFAP54Q96N23 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.24■□□□□ 0.35
CFAP54Q96N23 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.24■□□□□ 0.35
CFAP54Q96N23 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.24■□□□□ 0.35
CFAP54Q96N23 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFAP54Q96N23 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.24■□□□□ 0.35
CFAP54Q96N23 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.24■□□□□ 0.35
CFAP54Q96N23 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.24■□□□□ 0.35
CFAP54Q96N23 AL133338.1-201ENST00000565695 1517 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms