Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CT55Q8WUE5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CT55Q8WUE5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CT55Q8WUE5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CT55Q8WUE5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CT55Q8WUE5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CT55Q8WUE5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CT55Q8WUE5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CT55Q8WUE5 RPS8P6-201ENST00000426177 609 ntBASIC16.48■□□□□ 0.23
CT55Q8WUE5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CT55Q8WUE5 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CT55Q8WUE5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 BX276092.7-203ENST00000637198 1536 ntBASIC16.48■□□□□ 0.23
CT55Q8WUE5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.48■□□□□ 0.23
CT55Q8WUE5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CT55Q8WUE5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CT55Q8WUE5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CT55Q8WUE5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.47■□□□□ 0.23
CT55Q8WUE5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.47■□□□□ 0.23
CT55Q8WUE5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CT55Q8WUE5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CT55Q8WUE5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CT55Q8WUE5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CT55Q8WUE5 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CT55Q8WUE5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CT55Q8WUE5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.47■□□□□ 0.23
CT55Q8WUE5 AC018445.3-201ENST00000624177 1945 ntBASIC16.47■□□□□ 0.23
CT55Q8WUE5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CT55Q8WUE5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CT55Q8WUE5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CT55Q8WUE5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CT55Q8WUE5 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CT55Q8WUE5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.47■□□□□ 0.23
CT55Q8WUE5 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CT55Q8WUE5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CT55Q8WUE5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CT55Q8WUE5 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.47■□□□□ 0.23
CT55Q8WUE5 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CT55Q8WUE5 KRT18P2-201ENST00000447938 1258 ntBASIC16.47■□□□□ 0.23
CT55Q8WUE5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.47■□□□□ 0.23
CT55Q8WUE5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.47■□□□□ 0.23
CT55Q8WUE5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.47■□□□□ 0.23
CT55Q8WUE5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.47■□□□□ 0.23
CT55Q8WUE5 MIR4751-201ENST00000578027 74 ntBASIC16.47■□□□□ 0.23
CT55Q8WUE5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.47■□□□□ 0.23
CT55Q8WUE5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.47■□□□□ 0.23
CT55Q8WUE5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CT55Q8WUE5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CT55Q8WUE5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CT55Q8WUE5 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.47■□□□□ 0.23
CT55Q8WUE5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CT55Q8WUE5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.46■□□□□ 0.23
CT55Q8WUE5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CT55Q8WUE5 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CT55Q8WUE5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CT55Q8WUE5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CT55Q8WUE5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CT55Q8WUE5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CT55Q8WUE5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CT55Q8WUE5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CT55Q8WUE5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
CT55Q8WUE5 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CT55Q8WUE5 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CT55Q8WUE5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CT55Q8WUE5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CT55Q8WUE5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.46■□□□□ 0.23
CT55Q8WUE5 CRYGEP-201ENST00000412192 528 ntBASIC16.46■□□□□ 0.23
CT55Q8WUE5 DDX43P3-201ENST00000441064 443 ntBASIC16.46■□□□□ 0.23
CT55Q8WUE5 AC108073.2-201ENST00000464002 357 ntBASIC16.46■□□□□ 0.23
CT55Q8WUE5 RPS15P9-201ENST00000494093 319 ntBASIC16.46■□□□□ 0.23
CT55Q8WUE5 STK19B-204ENST00000512515 211 ntBASIC16.46■□□□□ 0.23
CT55Q8WUE5 STK25P1-201ENST00000585406 838 ntBASIC16.46■□□□□ 0.23
CT55Q8WUE5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.46■□□□□ 0.23
CT55Q8WUE5 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.46■□□□□ 0.23
CT55Q8WUE5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CT55Q8WUE5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.46■□□□□ 0.23
CT55Q8WUE5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.46■□□□□ 0.23
CT55Q8WUE5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CT55Q8WUE5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms