Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.87■□□□□ 0.61
TTC39CQ8N584 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.87■□□□□ 0.61
TTC39CQ8N584 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.87■□□□□ 0.61
TTC39CQ8N584 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TTC39CQ8N584 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39CQ8N584 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TTC39CQ8N584 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39CQ8N584 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39CQ8N584 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39CQ8N584 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TTC39CQ8N584 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
TTC39CQ8N584 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39CQ8N584 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39CQ8N584 AC133963.1-201ENST00000504166 1679 ntBASIC18.86■□□□□ 0.61
TTC39CQ8N584 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39CQ8N584 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39CQ8N584 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39CQ8N584 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
TTC39CQ8N584 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TTC39CQ8N584 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TTC39CQ8N584 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
TTC39CQ8N584 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39CQ8N584 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.86■□□□□ 0.61
TTC39CQ8N584 IGHV3-52-201ENST00000519770 353 ntBASIC18.86■□□□□ 0.61
TTC39CQ8N584 AC111152.3-201ENST00000569699 673 ntBASIC18.86■□□□□ 0.61
TTC39CQ8N584 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.86■□□□□ 0.61
TTC39CQ8N584 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.86■□□□□ 0.61
TTC39CQ8N584 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.86■□□□□ 0.61
TTC39CQ8N584 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.86■□□□□ 0.61
TTC39CQ8N584 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.86■□□□□ 0.61
TTC39CQ8N584 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.86■□□□□ 0.61
TTC39CQ8N584 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39CQ8N584 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39CQ8N584 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
TTC39CQ8N584 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TTC39CQ8N584 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.86■□□□□ 0.61
TTC39CQ8N584 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39CQ8N584 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39CQ8N584 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TTC39CQ8N584 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.85■□□□□ 0.61
TTC39CQ8N584 HLA-J-201ENST00000462773 1622 ntBASIC18.85■□□□□ 0.61
TTC39CQ8N584 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TTC39CQ8N584 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.85■□□□□ 0.61
TTC39CQ8N584 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39CQ8N584 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39CQ8N584 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39CQ8N584 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39CQ8N584 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.85■□□□□ 0.61
TTC39CQ8N584 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TTC39CQ8N584 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.85■□□□□ 0.61
TTC39CQ8N584 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.85■□□□□ 0.61
TTC39CQ8N584 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39CQ8N584 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39CQ8N584 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TTC39CQ8N584 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.85■□□□□ 0.61
TTC39CQ8N584 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39CQ8N584 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.85■□□□□ 0.61
TTC39CQ8N584 PRELID1P1-202ENST00000567272 903 ntBASIC18.85■□□□□ 0.61
TTC39CQ8N584 MIR5100-201ENST00000579544 119 ntBASIC18.85■□□□□ 0.61
TTC39CQ8N584 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.85■□□□□ 0.61
TTC39CQ8N584 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39CQ8N584 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39CQ8N584 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39CQ8N584 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TTC39CQ8N584 AC012317.2-201ENST00000623305 2251 ntBASIC18.85■□□□□ 0.61
TTC39CQ8N584 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39CQ8N584 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.85■□□□□ 0.61
TTC39CQ8N584 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39CQ8N584 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.84■□□□□ 0.61
TTC39CQ8N584 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39CQ8N584 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TTC39CQ8N584 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.84■□□□□ 0.61
TTC39CQ8N584 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39CQ8N584 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39CQ8N584 LINC00304-203ENST00000565008 1864 ntBASIC18.84■□□□□ 0.61
TTC39CQ8N584 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39CQ8N584 AC134043.2-201ENST00000624206 2238 ntBASIC18.84■□□□□ 0.61
TTC39CQ8N584 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39CQ8N584 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39CQ8N584 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39CQ8N584 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39CQ8N584 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39CQ8N584 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39CQ8N584 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TTC39CQ8N584 RCN1P2-201ENST00000398357 915 ntBASIC18.84■□□□□ 0.61
TTC39CQ8N584 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39CQ8N584 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39CQ8N584 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.84■□□□□ 0.61
TTC39CQ8N584 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.84■□□□□ 0.61
TTC39CQ8N584 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TTC39CQ8N584 KRT18P56-201ENST00000507275 550 ntBASIC18.84■□□□□ 0.61
TTC39CQ8N584 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39CQ8N584 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.84■□□□□ 0.61
TTC39CQ8N584 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.84■□□□□ 0.61
TTC39CQ8N584 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39CQ8N584 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39CQ8N584 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39CQ8N584 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39CQ8N584 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.84■□□□□ 0.61
TTC39CQ8N584 AC007613.1-201ENST00000572811 2597 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms