Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA6Q8N139 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA6Q8N139 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA6Q8N139 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC26.06■■□□□ 1.76
ABCA6Q8N139 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC26.06■■□□□ 1.76
ABCA6Q8N139 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA6Q8N139 AP001059.3-201ENST00000619053 235 ntBASIC26.06■■□□□ 1.76
ABCA6Q8N139 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
ABCA6Q8N139 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC26.06■■□□□ 1.76
ABCA6Q8N139 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC26.06■■□□□ 1.76
ABCA6Q8N139 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC26.06■■□□□ 1.76
ABCA6Q8N139 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
ABCA6Q8N139 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC26.05■■□□□ 1.76
ABCA6Q8N139 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ABCA6Q8N139 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
ABCA6Q8N139 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ABCA6Q8N139 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ABCA6Q8N139 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ABCA6Q8N139 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ABCA6Q8N139 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC26.05■■□□□ 1.76
ABCA6Q8N139 DDX43P3-201ENST00000441064 443 ntBASIC26.05■■□□□ 1.76
ABCA6Q8N139 SLC25A6P2-201ENST00000497974 877 ntBASIC26.05■■□□□ 1.76
ABCA6Q8N139 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC26.05■■□□□ 1.76
ABCA6Q8N139 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC26.05■■□□□ 1.76
ABCA6Q8N139 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC26.05■■□□□ 1.76
ABCA6Q8N139 RN7SL204P-201ENST00000582831 262 ntBASIC26.05■■□□□ 1.76
ABCA6Q8N139 AC026120.1-201ENST00000611536 926 ntBASIC26.05■■□□□ 1.76
ABCA6Q8N139 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
ABCA6Q8N139 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
ABCA6Q8N139 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ABCA6Q8N139 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC26.05■■□□□ 1.76
ABCA6Q8N139 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
ABCA6Q8N139 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
ABCA6Q8N139 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ABCA6Q8N139 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
ABCA6Q8N139 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ABCA6Q8N139 BX276092.7-203ENST00000637198 1536 ntBASIC26.04■■□□□ 1.76
ABCA6Q8N139 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC26.04■■□□□ 1.76
ABCA6Q8N139 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
ABCA6Q8N139 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
ABCA6Q8N139 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC26.04■■□□□ 1.76
ABCA6Q8N139 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC26.04■■□□□ 1.76
ABCA6Q8N139 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
ABCA6Q8N139 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC26.04■■□□□ 1.76
ABCA6Q8N139 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA6Q8N139 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC26.03■■□□□ 1.76
ABCA6Q8N139 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA6Q8N139 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC26.03■■□□□ 1.76
ABCA6Q8N139 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC26.03■■□□□ 1.76
ABCA6Q8N139 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC26.03■■□□□ 1.76
ABCA6Q8N139 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA6Q8N139 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
ABCA6Q8N139 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC26.03■■□□□ 1.76
ABCA6Q8N139 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA6Q8N139 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA6Q8N139 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA6Q8N139 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA6Q8N139 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA6Q8N139 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
ABCA6Q8N139 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
ABCA6Q8N139 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA6Q8N139 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC26.03■■□□□ 1.76
ABCA6Q8N139 AC140658.5-201ENST00000438532 169 ntBASIC26.03■■□□□ 1.76
ABCA6Q8N139 SPDYE11-202ENST00000450699 704 ntBASIC26.03■■□□□ 1.76
ABCA6Q8N139 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
ABCA6Q8N139 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA6Q8N139 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC26.03■■□□□ 1.76
ABCA6Q8N139 AL135744.1-201ENST00000565098 629 ntBASIC26.03■■□□□ 1.76
ABCA6Q8N139 SPDYE9P-201ENST00000570642 692 ntBASIC26.03■■□□□ 1.76
ABCA6Q8N139 SPDYE10P-202ENST00000612005 668 ntBASIC26.03■■□□□ 1.76
ABCA6Q8N139 SPDYE8P-202ENST00000612377 668 ntBASIC26.03■■□□□ 1.76
ABCA6Q8N139 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC26.03■■□□□ 1.76
ABCA6Q8N139 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA6Q8N139 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
ABCA6Q8N139 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ABCA6Q8N139 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC26.02■■□□□ 1.76
ABCA6Q8N139 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC26.02■■□□□ 1.76
ABCA6Q8N139 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC26.02■■□□□ 1.76
ABCA6Q8N139 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
ABCA6Q8N139 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC26.02■■□□□ 1.76
ABCA6Q8N139 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC26.02■■□□□ 1.76
ABCA6Q8N139 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC26.02■■□□□ 1.76
ABCA6Q8N139 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ABCA6Q8N139 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
ABCA6Q8N139 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC26.02■■□□□ 1.76
ABCA6Q8N139 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
ABCA6Q8N139 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ABCA6Q8N139 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC26.02■■□□□ 1.76
ABCA6Q8N139 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ABCA6Q8N139 WRB-204ENST00000398753 699 ntTSL 3 BASIC26.02■■□□□ 1.76
ABCA6Q8N139 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC26.02■■□□□ 1.76
ABCA6Q8N139 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ABCA6Q8N139 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
ABCA6Q8N139 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
ABCA6Q8N139 AC009949.1-201ENST00000623048 1830 ntBASIC26.02■■□□□ 1.76
ABCA6Q8N139 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ABCA6Q8N139 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ABCA6Q8N139 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
ABCA6Q8N139 CENPM-205ENST00000404067 905 ntTSL 3 BASIC26.01■■□□□ 1.75
ABCA6Q8N139 FAM58DP-201ENST00000428076 619 ntBASIC26.01■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms