Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 MIR770-201ENST00000390219 98 ntBASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 ACTL9-202ENST00000612068 1252 ntBASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
COL27A1Q8IZC6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 HLA-J-203ENST00000494367 1087 ntBASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 CXCL1P1-201ENST00000502804 216 ntBASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 AC093520.2-201ENST00000561830 333 ntBASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 AP000997.3-201ENST00000623333 2250 ntBASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL27A1Q8IZC6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 ACTG1P14-201ENST00000446382 1122 ntBASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 SLC25A6P2-201ENST00000497974 877 ntBASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 AC107918.2-201ENST00000530817 355 ntBASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 IGHV3-52-201ENST00000519770 353 ntBASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 AC105339.1-204ENST00000636249 355 ntBASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms