Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRRM1Q8IYB3 AL049637.2-201ENST00000641778 930 ntBASIC18.06■□□□□ 0.48
SRRM1Q8IYB3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SRRM1Q8IYB3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRRM1Q8IYB3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
SRRM1Q8IYB3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SRRM1Q8IYB3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.06■□□□□ 0.48
SRRM1Q8IYB3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRRM1Q8IYB3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.06■□□□□ 0.48
SRRM1Q8IYB3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.06■□□□□ 0.48
SRRM1Q8IYB3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SRRM1Q8IYB3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRRM1Q8IYB3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.06■□□□□ 0.48
SRRM1Q8IYB3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 AC106886.4-201ENST00000623557 2502 ntBASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SRRM1Q8IYB3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 AP001412.1-201ENST00000608405 714 ntBASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM1Q8IYB3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms