Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 KLF4P1-201ENST00000412782 1185 ntBASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 NCF1C-201ENST00000438382 1427 ntBASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 CRYGEP-201ENST00000412192 528 ntBASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 MIR4751-201ENST00000578027 74 ntBASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 AC092865.6-201ENST00000642101 219 ntBASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS3Q8IXF0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 VN2R19P-201ENST00000442399 1052 ntBASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 ALG1L5P-201ENST00000482043 771 ntBASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 YBX1P5-201ENST00000509441 847 ntBASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 AC005829.1-201ENST00000570002 483 ntBASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS3Q8IXF0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.28■□□□□ 0.52
NPAS3Q8IXF0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS3Q8IXF0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS3Q8IXF0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.28■□□□□ 0.52
NPAS3Q8IXF0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS3Q8IXF0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS3Q8IXF0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.28■□□□□ 0.52
NPAS3Q8IXF0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS3Q8IXF0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS3Q8IXF0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS3Q8IXF0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NPAS3Q8IXF0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS3Q8IXF0 AC003669.1-201ENST00000334569 611 ntBASIC18.28■□□□□ 0.52
NPAS3Q8IXF0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS3Q8IXF0 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.28■□□□□ 0.52
NPAS3Q8IXF0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms