Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LYSMD3Q7Z3D4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LYSMD3Q7Z3D4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 NSUN5P1-202ENST00000421140 1535 ntBASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 NSUN5P2-203ENST00000457352 1529 ntBASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 AC125634.1-201ENST00000438758 1403 ntBASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 AC104819.1-201ENST00000504587 486 ntBASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 AL138831.2-201ENST00000606564 490 ntBASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 AC116407.2-201ENST00000613639 860 ntBASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD3Q7Z3D4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.83■□□□□ 0.45
LYSMD3Q7Z3D4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LYSMD3Q7Z3D4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.83■□□□□ 0.45
LYSMD3Q7Z3D4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.83■□□□□ 0.45
LYSMD3Q7Z3D4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
LYSMD3Q7Z3D4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LYSMD3Q7Z3D4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
LYSMD3Q7Z3D4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LYSMD3Q7Z3D4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LYSMD3Q7Z3D4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
LYSMD3Q7Z3D4 PRORSD1P-202ENST00000563365 2154 ntBASIC17.83■□□□□ 0.45
LYSMD3Q7Z3D4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.83■□□□□ 0.45
LYSMD3Q7Z3D4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LYSMD3Q7Z3D4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 IGHV3-47-201ENST00000425060 335 ntBASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 KRT126P-201ENST00000549467 1181 ntBASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 AC012615.1-201ENST00000565797 1299 ntBASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms