Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.17
SHFQ7M4L6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SHFQ7M4L6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SHFQ7M4L6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SHFQ7M4L6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SHFQ7M4L6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.08■□□□□ 0.17
SHFQ7M4L6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
SHFQ7M4L6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.08■□□□□ 0.17
SHFQ7M4L6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SHFQ7M4L6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
SHFQ7M4L6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHFQ7M4L6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SHFQ7M4L6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHFQ7M4L6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHFQ7M4L6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHFQ7M4L6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.08■□□□□ 0.16
SHFQ7M4L6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SHFQ7M4L6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHFQ7M4L6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.08■□□□□ 0.16
SHFQ7M4L6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
SHFQ7M4L6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SHFQ7M4L6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.08■□□□□ 0.16
SHFQ7M4L6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SHFQ7M4L6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHFQ7M4L6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SHFQ7M4L6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHFQ7M4L6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHFQ7M4L6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SHFQ7M4L6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
SHFQ7M4L6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHFQ7M4L6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SHFQ7M4L6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHFQ7M4L6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SHFQ7M4L6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.08■□□□□ 0.16
SHFQ7M4L6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHFQ7M4L6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.08■□□□□ 0.16
SHFQ7M4L6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.08■□□□□ 0.16
SHFQ7M4L6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.08■□□□□ 0.16
SHFQ7M4L6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SHFQ7M4L6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
SHFQ7M4L6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.07■□□□□ 0.16
SHFQ7M4L6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SHFQ7M4L6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SHFQ7M4L6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.07■□□□□ 0.16
SHFQ7M4L6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.07■□□□□ 0.16
SHFQ7M4L6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 TSPY7P-201ENST00000431358 1114 ntBASIC16.07■□□□□ 0.16
SHFQ7M4L6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 AC128688.1-201ENST00000487626 519 ntBASIC16.07■□□□□ 0.16
SHFQ7M4L6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SHFQ7M4L6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.07■□□□□ 0.16
SHFQ7M4L6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.07■□□□□ 0.16
SHFQ7M4L6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.07■□□□□ 0.16
SHFQ7M4L6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.07■□□□□ 0.16
SHFQ7M4L6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.07■□□□□ 0.16
SHFQ7M4L6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.07■□□□□ 0.16
SHFQ7M4L6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.07■□□□□ 0.16
SHFQ7M4L6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.07■□□□□ 0.16
SHFQ7M4L6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.07■□□□□ 0.16
SHFQ7M4L6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.07■□□□□ 0.16
SHFQ7M4L6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.07■□□□□ 0.16
SHFQ7M4L6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHFQ7M4L6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
SHFQ7M4L6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHFQ7M4L6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHFQ7M4L6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SHFQ7M4L6 AC018695.7-201ENST00000624587 2492 ntBASIC16.06■□□□□ 0.16
SHFQ7M4L6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHFQ7M4L6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHFQ7M4L6 LINC00304-203ENST00000565008 1864 ntBASIC16.06■□□□□ 0.16
SHFQ7M4L6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SHFQ7M4L6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SHFQ7M4L6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHFQ7M4L6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHFQ7M4L6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHFQ7M4L6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHFQ7M4L6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHFQ7M4L6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHFQ7M4L6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHFQ7M4L6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHFQ7M4L6 TSPY14P-201ENST00000303979 915 ntBASIC16.06■□□□□ 0.16
SHFQ7M4L6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHFQ7M4L6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms