Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.98■□□□□ 0.63
CNKSR3Q6P9H4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 AC092902.6-201ENST00000641783 218 ntBASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 AL096828.2-201ENST00000567259 1965 ntBASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.97■□□□□ 0.63
CNKSR3Q6P9H4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 CXCL1P1-201ENST00000502804 216 ntBASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 AC068137.2-201ENST00000605408 478 ntBASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.96■□□□□ 0.63
CNKSR3Q6P9H4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 PI4KAP1-204ENST00000612579 1703 ntBASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 AC002558.1-201ENST00000488906 803 ntBASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 AC105339.1-204ENST00000636249 355 ntBASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 AC073130.3-201ENST00000624389 2278 ntBASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNKSR3Q6P9H4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms