Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 PTCHD3P3-201ENST00000403073 906 ntBASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 TSEN15P1-201ENST00000423257 515 ntBASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 AP000344.2-201ENST00000512987 629 ntBASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 AC019129.2-201ENST00000609837 1235 ntBASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD4Q5XG99 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.33■□□□□ 0.37
LYSMD4Q5XG99 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYSMD4Q5XG99 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYSMD4Q5XG99 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYSMD4Q5XG99 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYSMD4Q5XG99 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYSMD4Q5XG99 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
LYSMD4Q5XG99 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
LYSMD4Q5XG99 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.33■□□□□ 0.37
LYSMD4Q5XG99 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.33■□□□□ 0.37
LYSMD4Q5XG99 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 AP002414.1-201ENST00000391405 1147 ntBASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 AC074386.1-202ENST00000463561 864 ntBASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 IGHV3-52-201ENST00000519770 353 ntBASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 AC116407.2-201ENST00000613639 860 ntBASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 AC093028.1-201ENST00000622998 982 ntBASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 AC007064.4-201ENST00000637740 555 ntBASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 AC097637.2-201ENST00000624096 1997 ntBASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD4Q5XG99 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 STK25P1-201ENST00000585406 838 ntBASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD4Q5XG99 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 AC025580.3-201ENST00000617932 1424 ntBASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms