Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RFX7Q2KHR2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RFX7Q2KHR2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RFX7Q2KHR2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.42■■□□□ 1.02
RFX7Q2KHR2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFX7Q2KHR2 COX5BP2-201ENST00000392354 334 ntBASIC21.42■■□□□ 1.02
RFX7Q2KHR2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.42■■□□□ 1.02
RFX7Q2KHR2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.42■■□□□ 1.02
RFX7Q2KHR2 AC002558.1-201ENST00000488906 803 ntBASIC21.42■■□□□ 1.02
RFX7Q2KHR2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.42■■□□□ 1.02
RFX7Q2KHR2 FAM215A-202ENST00000632077 792 ntBASIC21.42■■□□□ 1.02
RFX7Q2KHR2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.42■■□□□ 1.02
RFX7Q2KHR2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.42■■□□□ 1.02
RFX7Q2KHR2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RFX7Q2KHR2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RFX7Q2KHR2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
RFX7Q2KHR2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFX7Q2KHR2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFX7Q2KHR2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.41■■□□□ 1.02
RFX7Q2KHR2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 SART3-203ENST00000546611 1184 ntBASIC21.41■■□□□ 1.02
RFX7Q2KHR2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFX7Q2KHR2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 PMS2P1-201ENST00000431037 1228 ntBASIC21.4■■□□□ 1.02
RFX7Q2KHR2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 AC067852.2-201ENST00000590513 2313 ntBASIC21.4■■□□□ 1.02
RFX7Q2KHR2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 AP005117.1-201ENST00000584346 1413 ntBASIC21.4■■□□□ 1.02
RFX7Q2KHR2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
RFX7Q2KHR2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RFX7Q2KHR2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
RFX7Q2KHR2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RFX7Q2KHR2 AL133373.2-201ENST00000623187 2828 ntBASIC21.39■■□□□ 1.02
RFX7Q2KHR2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.39■■□□□ 1.02
RFX7Q2KHR2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RFX7Q2KHR2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
RFX7Q2KHR2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RFX7Q2KHR2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RFX7Q2KHR2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.02
RFX7Q2KHR2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.39■■□□□ 1.02
RFX7Q2KHR2 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.39■■□□□ 1.02
RFX7Q2KHR2 ABCD1P5-201ENST00000445663 754 ntBASIC21.39■■□□□ 1.02
RFX7Q2KHR2 SCARNA2-201ENST00000458748 420 ntBASIC21.39■■□□□ 1.02
RFX7Q2KHR2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.39■■□□□ 1.02
RFX7Q2KHR2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.39■■□□□ 1.02
RFX7Q2KHR2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.39■■□□□ 1.02
RFX7Q2KHR2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.39■■□□□ 1.02
RFX7Q2KHR2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.39■■□□□ 1.02
RFX7Q2KHR2 MTDHP3-201ENST00000594186 672 ntBASIC21.39■■□□□ 1.02
RFX7Q2KHR2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.39■■□□□ 1.02
RFX7Q2KHR2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RFX7Q2KHR2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
RFX7Q2KHR2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFX7Q2KHR2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFX7Q2KHR2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
RFX7Q2KHR2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFX7Q2KHR2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFX7Q2KHR2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms