Protein–RNA interactions for Protein: Q07954

LRP1, Prolow-density lipoprotein receptor-related protein 1, humanhuman

Known RBP Predictions only

Length 4,544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1Q07954 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LRP1Q07954 AC003669.1-201ENST00000334569 611 ntBASIC10.4□□□□□ -0.75
LRP1Q07954 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC10.4□□□□□ -0.75
LRP1Q07954 AL627223.1-201ENST00000416693 442 ntBASIC10.4□□□□□ -0.75
LRP1Q07954 TIMM8BP1-201ENST00000452384 211 ntBASIC10.4□□□□□ -0.75
LRP1Q07954 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LRP1Q07954 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC10.4□□□□□ -0.75
LRP1Q07954 AC025678.2-201ENST00000562061 970 ntBASIC10.4□□□□□ -0.75
LRP1Q07954 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC10.4□□□□□ -0.75
LRP1Q07954 GMCL1P1-201ENST00000463439 1581 ntBASIC10.4□□□□□ -0.75
LRP1Q07954 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LRP1Q07954 AC005332.7-201ENST00000614046 2005 ntBASIC10.4□□□□□ -0.75
LRP1Q07954 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC10.4□□□□□ -0.75
LRP1Q07954 TUBB3P1-201ENST00000405796 1332 ntBASIC10.4□□□□□ -0.75
LRP1Q07954 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LRP1Q07954 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.75
LRP1Q07954 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
LRP1Q07954 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC10.39□□□□□ -0.75
LRP1Q07954 AL353135.1-201ENST00000606729 504 ntBASIC10.39□□□□□ -0.75
LRP1Q07954 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC10.39□□□□□ -0.75
LRP1Q07954 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LRP1Q07954 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC10.39□□□□□ -0.75
LRP1Q07954 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
LRP1Q07954 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
LRP1Q07954 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC10.39□□□□□ -0.75
LRP1Q07954 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 TERF1P3-201ENST00000505638 1227 ntBASIC10.39□□□□□ -0.75
LRP1Q07954 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC10.39□□□□□ -0.75
LRP1Q07954 TMED1-207ENST00000591695 809 ntTSL 5 BASIC10.39□□□□□ -0.75
LRP1Q07954 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC10.39□□□□□ -0.75
LRP1Q07954 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC10.39□□□□□ -0.75
LRP1Q07954 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC10.39□□□□□ -0.75
LRP1Q07954 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC10.39□□□□□ -0.75
LRP1Q07954 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC10.39□□□□□ -0.75
LRP1Q07954 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC10.39□□□□□ -0.75
LRP1Q07954 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC10.39□□□□□ -0.75
LRP1Q07954 CRB3P1-201ENST00000449338 276 ntBASIC10.39□□□□□ -0.75
LRP1Q07954 KRT8P48-201ENST00000515599 1220 ntBASIC10.39□□□□□ -0.75
LRP1Q07954 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
LRP1Q07954 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
LRP1Q07954 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LRP1Q07954 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 FUT8-AS1-201ENST00000621019 1521 ntBASIC10.39□□□□□ -0.75
LRP1Q07954 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC10.39□□□□□ -0.75
LRP1Q07954 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 WRB-204ENST00000398753 699 ntTSL 3 BASIC10.39□□□□□ -0.75
LRP1Q07954 NABP1-203ENST00000409510 843 ntTSL 5 BASIC10.39□□□□□ -0.75
LRP1Q07954 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC10.39□□□□□ -0.75
LRP1Q07954 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LRP1Q07954 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRP1Q07954 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC10.38□□□□□ -0.75
LRP1Q07954 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LRP1Q07954 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LRP1Q07954 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
LRP1Q07954 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LRP1Q07954 TFAMP1-201ENST00000412727 736 ntBASIC10.38□□□□□ -0.75
LRP1Q07954 AC010336.2-201ENST00000564226 506 ntBASIC10.38□□□□□ -0.75
LRP1Q07954 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
LRP1Q07954 GID4-202ENST00000376345 1391 ntTSL 3 BASIC10.38□□□□□ -0.75
LRP1Q07954 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
LRP1Q07954 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC10.38□□□□□ -0.75
LRP1Q07954 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LRP1Q07954 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LRP1Q07954 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LRP1Q07954 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC10.38□□□□□ -0.75
LRP1Q07954 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LRP1Q07954 HARS-201ENST00000307633 1780 ntTSL 2 BASIC10.38□□□□□ -0.75
LRP1Q07954 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
LRP1Q07954 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LRP1Q07954 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LRP1Q07954 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC10.38□□□□□ -0.75
LRP1Q07954 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LRP1Q07954 PTCHD3P3-201ENST00000403073 906 ntBASIC10.38□□□□□ -0.75
LRP1Q07954 NAA50-208ENST00000497255 789 ntTSL 5 BASIC10.38□□□□□ -0.75
LRP1Q07954 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC10.38□□□□□ -0.75
LRP1Q07954 HILS1-202ENST00000545329 423 ntBASIC10.38□□□□□ -0.75
LRP1Q07954 CD63-210ENST00000550776 870 ntTSL 5 BASIC10.38□□□□□ -0.75
LRP1Q07954 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC10.38□□□□□ -0.75
LRP1Q07954 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
LRP1Q07954 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
LRP1Q07954 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LRP1Q07954 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LRP1Q07954 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LRP1Q07954 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms